The 2.0 version of rSNPBase

Variant report

Variant rs10032952
Chromosome Location chr4:148939087-148939088
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:148918000-148968000 Weak transcription Gastric stomach
2 chr4:148921000-148945000 Weak transcription Esophagus oesophagus
3 chr4:148928800-148965400 Weak transcription Lung lung
4 chr4:148929200-148955400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr4:148929400-148942800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr4:148929600-148944200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr4:148929600-148944400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr4:148929800-148944400 Weak transcription HSMMtube muscle
9 chr4:148929800-148947200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr4:148930000-148944400 Weak transcription NHLF lung
11 chr4:148930000-148947600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr4:148936600-148940400 Enhancers Colon Smooth Muscle Colon
13 chr4:148936600-148947400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr4:148936600-148948600 Weak transcription GM12878-XiMat blood
15 chr4:148937000-148951600 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr4:148937200-148944400 Weak transcription Right Atrium heart
17 chr4:148937200-148945000 Weak transcription Fetal Muscle Leg muscle
18 chr4:148937200-148955800 Weak transcription Fetal Intestine Large intestine
19 chr4:148937400-148942800 Weak transcription Liver Liver
20 chr4:148937400-148942800 Weak transcription Stomach Smooth Muscle stomach
21 chr4:148937400-148944000 Weak transcription Muscle Satellite Cultured Cells --
22 chr4:148937600-148939400 Enhancers Aorta Aorta
23 chr4:148937800-148939800 Enhancers HUVEC blood vessel
24 chr4:148937800-148940600 Enhancers Breast Myoepithelial Primary Cells Breast
25 chr4:148938000-148944200 Weak transcription Brain Substantia Nigra brain
26 chr4:148938000-148944400 Weak transcription Right Ventricle heart
27 chr4:148938000-148951200 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr4:148938200-148939400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr4:148938400-148939600 Enhancers Fetal Heart heart
30 chr4:148938600-148939400 Enhancers Fetal Stomach stomach
31 chr4:148938800-148939200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr4:148938800-148939400 Enhancers Skeletal Muscle Male skeletal muscle
33 chr4:148938800-148939600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr4:148939000-148939200 Enhancers Left Ventricle heart
35 chr4:148939000-148939200 Enhancers Psoas Muscle Psoas
36 chr4:148939000-148939200 Enhancers Rectal Mucosa Donor 31 rectum
37 chr4:148939000-148939400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr4:148939000-148939400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr4:148939000-148939400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr4:148939000-148939400 Enhancers Brain Angular Gyrus brain
41 chr4:148939000-148939400 Enhancers Brain Cingulate Gyrus brain
42 chr4:148939000-148939400 Enhancers Ovary ovary
43 chr4:148939000-148939400 Enhancers Pancreas Pancrea
44 chr4:148939000-148939400 Enhancers Sigmoid Colon Sigmoid Colon
45 chr4:148939000-148939400 Enhancers Skeletal Muscle Female skeletal muscle
46 chr4:148939000-148939600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr4:148939000-148939600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr4:148939000-148939600 Enhancers Brain Hippocampus Middle brain
49 chr4:148939000-148939600 Enhancers Brain Inferior Temporal Lobe brain
50 chr4:148939000-148939800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015