Variant report

Variant rs28759001
Chromosome Location chr4:148979598-148979599
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:148947600-148980800 Weak transcription Pancreas Pancrea
2 chr4:148952000-148993600 Weak transcription NHDF-Ad bronchial
3 chr4:148960000-148993200 Weak transcription Thymus Thymus
4 chr4:148963600-148981800 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr4:148965400-148984200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr4:148965800-148981000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr4:148966400-148979800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr4:148966600-149003800 Weak transcription NH-A brain
9 chr4:148968400-149004000 Weak transcription HUVEC blood vessel
10 chr4:148968800-148980400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr4:148970000-148985800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr4:148970400-148985800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr4:148970800-148980800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr4:148971800-148981600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr4:148971800-148981600 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr4:148971800-148983800 Enhancers Fetal Heart heart
17 chr4:148972000-148981000 Enhancers Primary T helper cells PMA-I stimulated --
18 chr4:148972400-148981800 Enhancers Primary Natural Killer cells fromperipheralblood blood
19 chr4:148973000-148989000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr4:148974600-148979600 Enhancers Primary T helper naive cells from peripheral blood blood
21 chr4:148974600-148981600 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr4:148974800-148979800 Enhancers Primary T cells fromperipheralblood blood
23 chr4:148974800-148983000 Weak transcription Fetal Muscle Trunk muscle
24 chr4:148975000-148979600 Weak transcription Muscle Satellite Cultured Cells --
25 chr4:148975600-148980800 Weak transcription Small Intestine intestine
26 chr4:148975600-148981800 Enhancers GM12878-XiMat blood
27 chr4:148976000-148981600 Weak transcription Fetal Intestine Large intestine
28 chr4:148976200-148979600 Weak transcription H1 Cell Line embryonic stem cell
29 chr4:148976200-148979800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr4:148976200-148981600 Weak transcription Duodenum Mucosa Duodenum
31 chr4:148976400-148981600 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr4:148976400-148984600 Weak transcription HSMM muscle
33 chr4:148977000-148980800 Enhancers Liver Liver
34 chr4:148977200-148981000 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr4:148977200-148981600 Weak transcription Fetal Intestine Small intestine
36 chr4:148977800-148979800 Enhancers Duodenum Smooth Muscle Duodenum
37 chr4:148977800-148980000 Enhancers Colon Smooth Muscle Colon
38 chr4:148977800-148983600 Enhancers HUES6 Cell Line embryonic stem cell
39 chr4:148978000-148979800 Enhancers Primary B cells from peripheral blood blood
40 chr4:148978000-148980000 Enhancers Brain Substantia Nigra brain
41 chr4:148978000-148980200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
42 chr4:148978000-148981000 Enhancers Brain Hippocampus Middle brain
43 chr4:148978000-148981400 Enhancers Fetal Muscle Leg muscle
44 chr4:148978000-148981800 Enhancers Stomach Smooth Muscle stomach
45 chr4:148978000-148982600 Enhancers Primary hematopoietic stem cells short term culture blood
46 chr4:148978000-148983800 Enhancers Skeletal Muscle Female skeletal muscle
47 chr4:148978200-148980000 Enhancers Brain Anterior Caudate brain
48 chr4:148978200-148980200 Enhancers Fetal Brain Female brain
49 chr4:148978200-148980200 Enhancers Left Ventricle heart
50 chr4:148978200-148980600 Enhancers Brain Inferior Temporal Lobe brain

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