The 2.0 version of rSNPBase

Variant report

Variant rs10008133
Chromosome Location chr4:148975522-148975523
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:148939400-148978600 Weak transcription Ovary ovary
2 chr4:148947600-148980800 Weak transcription Pancreas Pancrea
3 chr4:148948600-148978000 Weak transcription NHLF lung
4 chr4:148952000-148993600 Weak transcription NHDF-Ad bronchial
5 chr4:148960000-148993200 Weak transcription Thymus Thymus
6 chr4:148963600-148981800 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr4:148964000-148978200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr4:148964400-148977200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr4:148965400-148978000 Weak transcription Brain Substantia Nigra brain
10 chr4:148965400-148984200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr4:148965800-148981000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr4:148966200-148978000 Weak transcription Brain Hippocampus Middle brain
13 chr4:148966400-148977800 Weak transcription NHEK skin
14 chr4:148966400-148979800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr4:148966600-149003800 Weak transcription NH-A brain
16 chr4:148967200-148977200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr4:148968400-149004000 Weak transcription HUVEC blood vessel
18 chr4:148968600-148978200 Weak transcription Esophagus oesophagus
19 chr4:148968800-148978000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr4:148968800-148978000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr4:148968800-148980400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr4:148969600-148978200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr4:148970000-148977800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr4:148970000-148978200 Weak transcription Brain Anterior Caudate brain
25 chr4:148970000-148985800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr4:148970400-148985800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr4:148970800-148975600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr4:148970800-148976400 Weak transcription Fetal Stomach stomach
29 chr4:148970800-148977800 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr4:148970800-148980800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr4:148971000-148975600 Weak transcription GM12878-XiMat blood
32 chr4:148971200-148978000 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr4:148971800-148981600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
34 chr4:148971800-148981600 Enhancers Primary T helper naive cells fromperipheralblood blood
35 chr4:148971800-148983800 Enhancers Fetal Heart heart
36 chr4:148972000-148981000 Enhancers Primary T helper cells PMA-I stimulated --
37 chr4:148972200-148978800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr4:148972200-148979000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
39 chr4:148972400-148981800 Enhancers Primary Natural Killer cells fromperipheralblood blood
40 chr4:148973000-148978000 Weak transcription Spleen Spleen
41 chr4:148973000-148989000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr4:148973400-148979400 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr4:148973600-148976000 Enhancers Liver Liver
44 chr4:148973600-148978400 Weak transcription Primary hematopoietic stem cells blood
45 chr4:148973800-148975800 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr4:148973800-148976000 Enhancers Duodenum Smooth Muscle Duodenum
47 chr4:148973800-148976600 Enhancers Fetal Muscle Leg muscle
48 chr4:148973800-148977800 Weak transcription Primary B cells from cord blood blood
49 chr4:148974000-148975600 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr4:148974000-148977800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015