The 2.0 version of rSNPBase

Variant report

Variant rs28544401
Chromosome Location chr4:148967071-148967072
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:148918000-148968000 Weak transcription Gastric stomach
2 chr4:148939400-148978600 Weak transcription Ovary ovary
3 chr4:148939800-148967600 Weak transcription HUVEC blood vessel
4 chr4:148945200-148968000 Weak transcription Esophagus oesophagus
5 chr4:148946200-148968200 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr4:148947600-148980800 Weak transcription Pancreas Pancrea
7 chr4:148948600-148978000 Weak transcription NHLF lung
8 chr4:148952000-148993600 Weak transcription NHDF-Ad bronchial
9 chr4:148952200-148968200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr4:148952200-148969800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr4:148952800-148969600 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr4:148955200-148968000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr4:148958600-148972600 Weak transcription Spleen Spleen
14 chr4:148960000-148993200 Weak transcription Thymus Thymus
15 chr4:148961400-148970400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr4:148962600-148968000 Weak transcription Aorta Aorta
17 chr4:148963200-148975400 Weak transcription Fetal Intestine Small intestine
18 chr4:148963600-148981800 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr4:148963800-148968000 Weak transcription Duodenum Mucosa Duodenum
20 chr4:148964000-148974800 Weak transcription Fetal Kidney kidney
21 chr4:148964000-148978200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr4:148964200-148970800 Enhancers Fetal Heart heart
23 chr4:148964400-148972200 Weak transcription Placenta Amnion Placenta Amnion
24 chr4:148964400-148975200 Weak transcription Fetal Intestine Large intestine
25 chr4:148964400-148977200 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr4:148964600-148968000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr4:148965400-148967200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr4:148965400-148978000 Weak transcription Brain Substantia Nigra brain
29 chr4:148965400-148984200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr4:148965600-148969400 Weak transcription Colon Smooth Muscle Colon
31 chr4:148965600-148969600 Weak transcription Rectal Smooth Muscle rectum
32 chr4:148965600-148970200 Weak transcription Fetal Stomach stomach
33 chr4:148965600-148972600 Weak transcription Right Atrium heart
34 chr4:148965800-148968000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr4:148965800-148968000 Weak transcription Adipose Nuclei Adipose
36 chr4:148965800-148968000 Weak transcription Stomach Smooth Muscle stomach
37 chr4:148965800-148968000 Weak transcription HSMMtube muscle
38 chr4:148965800-148968200 Weak transcription Liver Liver
39 chr4:148965800-148972200 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr4:148965800-148973200 Weak transcription Fetal Thymus thymus
41 chr4:148965800-148974000 Weak transcription Lung lung
42 chr4:148965800-148974600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr4:148965800-148981000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr4:148966000-148968000 Weak transcription Left Ventricle heart
45 chr4:148966000-148968200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr4:148966000-148968600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr4:148966000-148969800 Weak transcription Psoas Muscle Psoas
48 chr4:148966000-148974600 Weak transcription Muscle Satellite Cultured Cells --
49 chr4:148966200-148967600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr4:148966200-148968000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015