The 2.0 version of rSNPBase

Variant report

Variant rs28519574
Chromosome Location chr4:148932942-148932943
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:148885600-148939000 Weak transcription Pancreas Pancrea
2 chr4:148889200-148936200 Weak transcription Fetal Intestine Large intestine
3 chr4:148911600-148936200 Weak transcription H9 Cell Line embryonic stem cell
4 chr4:148913600-148933200 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr4:148918000-148968000 Weak transcription Gastric stomach
6 chr4:148918200-148937000 Weak transcription Stomach Smooth Muscle stomach
7 chr4:148921000-148945000 Weak transcription Esophagus oesophagus
8 chr4:148928800-148965400 Weak transcription Lung lung
9 chr4:148929200-148955400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr4:148929400-148938400 Weak transcription Fetal Heart heart
11 chr4:148929400-148942800 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr4:148929600-148944200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr4:148929600-148944400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr4:148929800-148933000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr4:148929800-148935200 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr4:148929800-148936200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr4:148929800-148936200 Weak transcription Ovary ovary
18 chr4:148929800-148936400 Weak transcription Psoas Muscle Psoas
19 chr4:148929800-148936400 Weak transcription Right Atrium heart
20 chr4:148929800-148936400 Weak transcription Right Ventricle heart
21 chr4:148929800-148937000 Weak transcription HSMM muscle
22 chr4:148929800-148944400 Weak transcription HSMMtube muscle
23 chr4:148929800-148947200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr4:148930000-148935800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr4:148930000-148939000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr4:148930000-148944400 Weak transcription NHLF lung
27 chr4:148930000-148947600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr4:148930200-148939000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr4:148930800-148939000 Weak transcription Brain Angular Gyrus brain
30 chr4:148932400-148933000 Enhancers Left Ventricle heart
31 chr4:148932600-148933600 Enhancers Skeletal Muscle Female skeletal muscle
32 chr4:148932600-148935600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr4:148932800-148937000 Weak transcription Aorta Aorta
34 chr4:148932800-148938600 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015