Variant report

Variant	rs10036661
Chromosome Location	chr5:167538879-167538880
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:167534684..167536945-chr5:167537584..167539652,2	K562	blood:

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10040185	0.89[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10043193	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10043220	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10055910	0.88[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10067987	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1006807	1.00[CHB][hapmap];0.90[EUR][1000 genomes]
rs10079060	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12519918	1.00[JPT][hapmap]
rs12652250	1.00[JPT][hapmap]
rs1432822	1.00[CHB][hapmap];0.89[EUR][1000 genomes]
rs17069812	1.00[JPT][hapmap]
rs17440127	1.00[CHB][hapmap]
rs2569045	1.00[JPT][hapmap]
rs2617974	0.88[CEU][hapmap];1.00[CHB][hapmap];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs3101761	1.00[JPT][hapmap]
rs34454819	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62383404	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62383405	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs68186230	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs750849	1.00[JPT][hapmap]
rs750851	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167517400-167539400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr5:167526800-167552800	Weak transcription	Fetal Heart	heart
3	chr5:167532000-167544800	Weak transcription	Gastric	stomach
4	chr5:167532600-167542600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr5:167532600-167552800	Weak transcription	Right Ventricle	heart
6	chr5:167533600-167540000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
7	chr5:167533800-167559200	Weak transcription	NH-A	brain
8	chr5:167534000-167545200	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr5:167534200-167549600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr5:167537000-167544800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr5:167537000-167550800	Weak transcription	HSMM	muscle
12	chr5:167537800-167541400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr5:167537800-167545200	Weak transcription	H9 Cell Line	embryonic stem cell
14	chr5:167538000-167539000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr5:167538400-167541400	Weak transcription	NHEK	skin
16	chr5:167538400-167544800	Weak transcription	Left Ventricle	heart
17	chr5:167538800-167542800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr5:167538800-167544600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr5:167538800-167544800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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