The 2.0 version of rSNPBase

Variant report

Variant rs10054246
Chromosome Location chr5:94937921-94937922
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:94900400-94942400 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr5:94904600-94939400 Weak transcription Primary B cells from peripheral blood blood
3 chr5:94905000-94939200 Weak transcription Aorta Aorta
4 chr5:94905000-94940600 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr5:94912800-94943400 Weak transcription Fetal Intestine Small intestine
6 chr5:94915000-94939000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr5:94917400-94940800 Weak transcription Fetal Brain Male brain
8 chr5:94926400-94941800 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr5:94926800-94938600 Weak transcription K562 blood
10 chr5:94926800-94942000 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr5:94927000-94940800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr5:94927000-94948800 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr5:94927000-94954200 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr5:94927000-94954200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr5:94927400-94938400 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr5:94927600-94951800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr5:94927800-94941200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr5:94927800-94952200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr5:94928200-94938400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr5:94928200-94952200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr5:94928400-94938200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr5:94928400-94948600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr5:94928600-94941800 Weak transcription HMEC breast
24 chr5:94933600-94948600 Weak transcription Pancreas Pancrea
25 chr5:94935000-94940000 Weak transcription Brain Hippocampus Middle brain
26 chr5:94935200-94941000 Weak transcription Fetal Stomach stomach
27 chr5:94935200-94942000 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr5:94935800-94938200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr5:94935800-94939200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr5:94936000-94938600 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr5:94936200-94938000 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr5:94936200-94938200 Strong transcription Primary T cells from cord blood blood
33 chr5:94936200-94938600 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr5:94936400-94939600 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr5:94936600-94938000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr5:94936600-94938000 Strong transcription Fetal Muscle Trunk muscle
37 chr5:94936600-94938000 Strong transcription Fetal Thymus thymus
38 chr5:94936800-94938000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr5:94936800-94938000 Strong transcription Primary T cells fromperipheralblood blood
40 chr5:94936800-94938000 Strong transcription Primary T helper cells PMA-I stimulated --
41 chr5:94936800-94938000 Weak transcription Fetal Heart heart
42 chr5:94936800-94938400 Strong transcription Primary T regulatory cells fromperipheralblood blood
43 chr5:94937000-94940800 Weak transcription Osteobl bone
44 chr5:94937000-94941600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr5:94937000-94943400 Weak transcription Fetal Muscle Leg muscle
46 chr5:94937200-94939000 Weak transcription Adipose Nuclei Adipose
47 chr5:94937200-94939000 Weak transcription Fetal Kidney kidney
48 chr5:94937200-94940800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr5:94937200-94948200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr5:94937400-94945400 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015