Variant report
| Variant | rs10056478 |
|---|---|
| Chromosome Location | chr5:147756877-147756878 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:147729200-147762200 | Weak transcription | Aorta | Aorta |
| 2 | chr5:147747800-147762400 | Weak transcription | Ovary | ovary |
| 3 | chr5:147749600-147757400 | Weak transcription | Psoas Muscle | Psoas |
| 4 | chr5:147749800-147757400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 5 | chr5:147749800-147762200 | Weak transcription | Adipose Nuclei | Adipose |
| 6 | chr5:147750000-147762400 | Weak transcription | Brain Substantia Nigra | brain |
| 7 | chr5:147751200-147761800 | Weak transcription | Fetal Brain Male | brain |
| 8 | chr5:147751400-147763000 | Weak transcription | Esophagus | oesophagus |
| 9 | chr5:147751800-147762400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 10 | chr5:147752200-147760800 | Weak transcription | Fetal Lung | lung |
| 11 | chr5:147752600-147761000 | Weak transcription | Brain Germinal Matrix | brain |
| 12 | chr5:147752600-147762200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 13 | chr5:147752600-147762600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 14 | chr5:147752800-147762600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 15 | chr5:147752800-147762800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 16 | chr5:147753200-147757000 | Weak transcription | Primary B cells from cord blood | blood |
| 17 | chr5:147753200-147762200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 18 | chr5:147754400-147762200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 19 | chr5:147754400-147762200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 20 | chr5:147754400-147762400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 21 | chr5:147754600-147757400 | Weak transcription | Left Ventricle | heart |
| 22 | chr5:147754600-147762400 | Weak transcription | Stomach Mucosa | stomach |
| 23 | chr5:147754800-147758200 | Weak transcription | Fetal Intestine Small | intestine |
| 24 | chr5:147754800-147762400 | Weak transcription | Fetal Intestine Large | intestine |
| 25 | chr5:147755000-147758000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 26 | chr5:147755000-147762000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 27 | chr5:147755000-147762200 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 28 | chr5:147755200-147758200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 29 | chr5:147755200-147758600 | Weak transcription | Primary T cells from cord blood | blood |
| 30 | chr5:147755400-147762000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 31 | chr5:147755400-147762400 | Weak transcription | Fetal Stomach | stomach |
| 32 | chr5:147755400-147762400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 33 | chr5:147755400-147762600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 34 | chr5:147755600-147761600 | Weak transcription | Right Atrium | heart |
| 35 | chr5:147755600-147762400 | Weak transcription | Pancreas | Pancrea |
| 36 | chr5:147755600-147763000 | Weak transcription | Lung | lung |
| 37 | chr5:147755800-147757800 | Enhancers | Fetal Heart | heart |
| 38 | chr5:147755800-147758000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 39 | chr5:147755800-147762400 | Weak transcription | Fetal Muscle Leg | muscle |
| 40 | chr5:147756000-147762600 | Weak transcription | Right Ventricle | heart |
| 41 | chr5:147756200-147762200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 42 | chr5:147756400-147757800 | Weak transcription | Thymus | Thymus |
| 43 | chr5:147756600-147757000 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 44 | chr5:147756600-147757800 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 45 | chr5:147756600-147757800 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 46 | chr5:147756600-147758200 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 47 | chr5:147756600-147758200 | Strong transcription | Liver | Liver |
| 48 | chr5:147756600-147758400 | Strong transcription | Brain Anterior Caudate | brain |
| 49 | chr5:147756600-147758400 | Strong transcription | Brain Hippocampus Middle | brain |
| 50 | chr5:147756600-147758400 | Strong transcription | Brain Dorsolateral Prefrontal Cortex | brain |
