The 2.0 version of rSNPBase

Variant report

Variant rs10071193
Chromosome Location chr5:147771989-147771990
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:147764400-147773000 Weak transcription H9 Cell Line embryonic stem cell
2 chr5:147764400-147777200 Weak transcription Fetal Muscle Trunk muscle
3 chr5:147764400-147789800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr5:147764400-147795400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr5:147764400-147796600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr5:147764400-147806800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr5:147764600-147772200 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr5:147764600-147772400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr5:147764600-147773800 Weak transcription HSMM muscle
10 chr5:147764600-147774400 Weak transcription HMEC breast
11 chr5:147764800-147772600 Weak transcription Fetal Brain Female brain
12 chr5:147764800-147777400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr5:147765000-147784600 Weak transcription Fetal Stomach stomach
14 chr5:147765200-147774200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr5:147765200-147774400 Weak transcription Fetal Lung lung
16 chr5:147765200-147777600 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr5:147765200-147778400 Weak transcription Fetal Kidney kidney
18 chr5:147765200-147778600 Weak transcription Stomach Smooth Muscle stomach
19 chr5:147765200-147796200 Weak transcription Esophagus oesophagus
20 chr5:147765600-147778600 Weak transcription Rectal Smooth Muscle rectum
21 chr5:147765600-147784200 Weak transcription Colonic Mucosa Colon
22 chr5:147765800-147772000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr5:147765800-147772000 Weak transcription Fetal Brain Male brain
24 chr5:147765800-147772200 Weak transcription Brain Substantia Nigra brain
25 chr5:147765800-147772400 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr5:147765800-147773800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr5:147765800-147774400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr5:147765800-147778600 Weak transcription Brain Cingulate Gyrus brain
29 chr5:147765800-147789600 Weak transcription Lung lung
30 chr5:147766000-147772200 Weak transcription Psoas Muscle Psoas
31 chr5:147766000-147772600 Weak transcription Brain Inferior Temporal Lobe brain
32 chr5:147766000-147772800 Weak transcription Brain Angular Gyrus brain
33 chr5:147766000-147774200 Weak transcription Thymus Thymus
34 chr5:147766000-147776000 Weak transcription Brain Germinal Matrix brain
35 chr5:147766200-147773600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr5:147766200-147774600 Weak transcription Hela-S3 cervix
37 chr5:147766200-147778000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr5:147766200-147778600 Weak transcription HSMMtube muscle
39 chr5:147766200-147789600 Weak transcription Spleen Spleen
40 chr5:147766400-147772600 Weak transcription Dnd41 blood
41 chr5:147766400-147780800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr5:147766600-147778400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr5:147767200-147772800 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr5:147767200-147778600 Weak transcription NHLF lung
45 chr5:147767400-147772800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr5:147767400-147774400 Weak transcription Muscle Satellite Cultured Cells --
47 chr5:147767800-147774600 Weak transcription NHDF-Ad bronchial
48 chr5:147768000-147772400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr5:147768200-147772600 Weak transcription NH-A brain
50 chr5:147768200-147772800 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015