The 2.0 version of rSNPBase

Variant report

Variant rs10476893
Chromosome Location chr5:147773608-147773609
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:147764400-147777200 Weak transcription Fetal Muscle Trunk muscle
2 chr5:147764400-147789800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr5:147764400-147795400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:147764400-147796600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr5:147764400-147806800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr5:147764600-147773800 Weak transcription HSMM muscle
7 chr5:147764600-147774400 Weak transcription HMEC breast
8 chr5:147764800-147777400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr5:147765000-147784600 Weak transcription Fetal Stomach stomach
10 chr5:147765200-147774200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr5:147765200-147774400 Weak transcription Fetal Lung lung
12 chr5:147765200-147777600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr5:147765200-147778400 Weak transcription Fetal Kidney kidney
14 chr5:147765200-147778600 Weak transcription Stomach Smooth Muscle stomach
15 chr5:147765200-147796200 Weak transcription Esophagus oesophagus
16 chr5:147765600-147778600 Weak transcription Rectal Smooth Muscle rectum
17 chr5:147765600-147784200 Weak transcription Colonic Mucosa Colon
18 chr5:147765800-147773800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr5:147765800-147774400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr5:147765800-147778600 Weak transcription Brain Cingulate Gyrus brain
21 chr5:147765800-147789600 Weak transcription Lung lung
22 chr5:147766000-147774200 Weak transcription Thymus Thymus
23 chr5:147766000-147776000 Weak transcription Brain Germinal Matrix brain
24 chr5:147766200-147774600 Weak transcription Hela-S3 cervix
25 chr5:147766200-147778000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr5:147766200-147778600 Weak transcription HSMMtube muscle
27 chr5:147766200-147789600 Weak transcription Spleen Spleen
28 chr5:147766400-147780800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr5:147766600-147778400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr5:147767200-147778600 Weak transcription NHLF lung
31 chr5:147767400-147774400 Weak transcription Muscle Satellite Cultured Cells --
32 chr5:147767800-147774600 Weak transcription NHDF-Ad bronchial
33 chr5:147768200-147774400 Weak transcription Placenta Placenta
34 chr5:147768200-147778400 Weak transcription Brain Anterior Caudate brain
35 chr5:147768200-147805200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr5:147768400-147773800 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr5:147768400-147774200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr5:147768400-147774400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr5:147768400-147774400 Weak transcription GM12878-XiMat blood
40 chr5:147768400-147789800 Weak transcription Aorta Aorta
41 chr5:147768600-147773800 Weak transcription NHEK skin
42 chr5:147768800-147774200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr5:147769000-147774400 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr5:147769200-147774000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr5:147769200-147774200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr5:147769200-147778600 Weak transcription Fetal Muscle Leg muscle
47 chr5:147769800-147773800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
48 chr5:147770000-147774200 Enhancers Rectal Mucosa Donor 31 rectum
49 chr5:147770600-147774400 Weak transcription Primary hematopoietic stem cells blood
50 chr5:147770800-147774600 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015