Variant report

Variant	rs10094704
Chromosome Location	chr8:49921923-49921924
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10090063	1.00[AMR][1000 genomes]
rs10096060	1.00[AMR][1000 genomes]
rs10096185	1.00[AMR][1000 genomes]
rs10096769	1.00[AMR][1000 genomes]
rs10097472	1.00[AMR][1000 genomes]
rs10100956	1.00[AMR][1000 genomes]
rs10101461	1.00[AMR][1000 genomes]
rs10101665	1.00[AMR][1000 genomes]
rs10101898	1.00[AMR][1000 genomes]
rs10102956	1.00[AMR][1000 genomes]
rs10103245	1.00[AMR][1000 genomes]
rs10105435	1.00[AMR][1000 genomes]
rs10106281	1.00[AMR][1000 genomes]
rs10109165	1.00[AMR][1000 genomes]
rs10111733	1.00[AMR][1000 genomes]
rs10112299	1.00[AMR][1000 genomes]
rs13439339	1.00[AMR][1000 genomes]
rs16939236	1.00[AMR][1000 genomes]
rs28513475	1.00[AMR][1000 genomes]
rs28521962	1.00[AMR][1000 genomes]
rs28528093	1.00[AMR][1000 genomes]
rs28552792	1.00[AMR][1000 genomes]
rs28589414	1.00[AMR][1000 genomes]
rs28612086	1.00[AMR][1000 genomes]
rs28635092	1.00[AMR][1000 genomes]
rs56790040	1.00[AMR][1000 genomes]
rs60355726	1.00[AMR][1000 genomes]
rs73678536	1.00[AMR][1000 genomes]
rs73680747	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv6181	chr8:49885342-49930514	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49920600-49922600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr8:49920600-49922600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr8:49920600-49923000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr8:49921400-49922000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr8:49921600-49922000	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr8:49921600-49922800	Weak transcription	Psoas Muscle	Psoas
7	chr8:49921800-49922200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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