Variant report

Variant	rs10131768
Chromosome Location	chr14:55546648-55546649
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11848846	0.86[EUR][1000 genomes]
rs2147964	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2340921	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56262555	0.87[EUR][1000 genomes]
rs6573001	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8003624	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8004416	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs8005399	0.80[EUR][1000 genomes]
rs8012156	0.85[EUR][1000 genomes]
rs8012676	0.87[EUR][1000 genomes]
rs8019978	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs873061	0.81[ASN][1000 genomes]
rs9323278	0.80[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55530000-55554000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr14:55541600-55556800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr14:55544200-55556800	Weak transcription	Rectal Mucosa Donor 29	rectum
4	chr14:55544400-55556200	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr14:55544800-55557000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr14:55544800-55558600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr14:55545000-55561400	Weak transcription	HMEC	breast
8	chr14:55545800-55546800	Enhancers	GM12878-XiMat	blood
9	chr14:55546000-55547800	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr14:55546200-55547000	Enhancers	Hela-S3	cervix
11	chr14:55546200-55551200	Weak transcription	Fetal Intestine Small	intestine
12	chr14:55546400-55547400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr14:55546600-55547400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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