The 2.0 version of rSNPBase

Variant report

Variant rs10133196
Chromosome Location chr14:65163588-65163589
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:65149400-65169400 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr14:65155600-65165200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr14:65156000-65165000 Weak transcription Primary hematopoietic stem cells blood
4 chr14:65156000-65165200 Weak transcription Fetal Thymus thymus
5 chr14:65158800-65164600 Enhancers Primary neutrophils fromperipheralblood blood
6 chr14:65159000-65166000 Enhancers Brain Hippocampus Middle brain
7 chr14:65159200-65163600 Enhancers Fetal Heart heart
8 chr14:65160000-65165600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr14:65160000-65165800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr14:65160000-65168400 Weak transcription HMEC breast
11 chr14:65160000-65168600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr14:65160200-65165400 Weak transcription NHEK skin
13 chr14:65160800-65164800 Weak transcription Primary B cells from cord blood blood
14 chr14:65160800-65166600 Enhancers Fetal Intestine Small intestine
15 chr14:65161000-65164000 Weak transcription Placenta Placenta
16 chr14:65161000-65165000 Weak transcription Adipose Nuclei Adipose
17 chr14:65161200-65165000 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr14:65161200-65169200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr14:65161400-65168200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr14:65161600-65164600 Weak transcription Fetal Muscle Leg muscle
21 chr14:65161600-65165800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr14:65161800-65168400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr14:65162000-65165200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr14:65162000-65167600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr14:65162200-65164000 Enhancers Fetal Intestine Large intestine
26 chr14:65162200-65165200 Weak transcription Fetal Lung lung
27 chr14:65162200-65165600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr14:65162200-65169800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr14:65162600-65163600 Enhancers Pancreatic Islets Pancreatic Islet
30 chr14:65162800-65163600 Enhancers iPS-18 Cell Line embryonic stem cell
31 chr14:65162800-65163600 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr14:65162800-65163800 Enhancers Rectal Smooth Muscle rectum
33 chr14:65162800-65165600 Enhancers Brain Substantia Nigra brain
34 chr14:65162800-65166400 Enhancers Primary T helper cells fromperipheralblood blood
35 chr14:65162800-65166400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
36 chr14:65162800-65166600 Enhancers Primary Natural Killer cells fromperipheralblood blood
37 chr14:65163000-65163600 Enhancers H1 Cell Line embryonic stem cell
38 chr14:65163000-65163600 Enhancers Cortex derived primary cultured neurospheres brain
39 chr14:65163000-65163600 Enhancers Brain Angular Gyrus brain
40 chr14:65163000-65163600 Enhancers Brain Anterior Caudate brain
41 chr14:65163000-65163800 Enhancers Colonic Mucosa Colon
42 chr14:65163000-65164200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr14:65163000-65164200 Enhancers Primary T killer naive cells fromperipheralblood blood
44 chr14:65163000-65165800 Enhancers Primary T killer memory cells from peripheral blood blood
45 chr14:65163000-65166400 Enhancers Primary T helper cells PMA-I stimulated --
46 chr14:65163200-65163600 Enhancers Brain Cingulate Gyrus brain
47 chr14:65163200-65163600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
48 chr14:65163200-65164000 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr14:65163200-65164000 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr14:65163200-65164400 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015