Variant report

Variant	rs74056321
Chromosome Location	chr14:65041368-65041369
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:64909070..64910820-chr14:65039192..65042111,2	K562	blood:
2	chr14:65035525..65037855-chr14:65039910..65042725,2	MCF-7	breast:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10130553	1.00[AMR][1000 genomes]
rs10133196	1.00[AMR][1000 genomes]
rs10135368	1.00[AMR][1000 genomes]
rs12101185	1.00[AMR][1000 genomes]
rs17101973	1.00[AMR][1000 genomes]
rs41381946	1.00[AMR][1000 genomes]
rs41456047	1.00[AMR][1000 genomes]
rs55845128	1.00[AMR][1000 genomes]
rs58703532	1.00[AMR][1000 genomes]
rs60242081	1.00[AMR][1000 genomes]
rs73271700	1.00[AMR][1000 genomes]
rs74056335	1.00[AMR][1000 genomes]
rs74056355	1.00[AMR][1000 genomes]
rs74056368	1.00[AMR][1000 genomes]
rs74056389	1.00[AMR][1000 genomes]
rs74056393	1.00[AMR][1000 genomes]
rs74056398	1.00[AMR][1000 genomes]
rs74056399	1.00[AMR][1000 genomes]
rs74056402	1.00[AMR][1000 genomes]
rs74056451	1.00[AMR][1000 genomes]
rs74056453	1.00[AMR][1000 genomes]
rs74056462	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74058205	1.00[AMR][1000 genomes]
rs74058206	1.00[AMR][1000 genomes]
rs74058207	1.00[AMR][1000 genomes]
rs74058208	1.00[AMR][1000 genomes]
rs74058211	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049097	chr14:65027753-65202018	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65021600-65047600	Weak transcription	Pancreas	Pancrea
2	chr14:65036000-65041600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr14:65036200-65044000	Weak transcription	Fetal Kidney	kidney
4	chr14:65039000-65041400	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr14:65039000-65041800	Enhancers	H1 Cell Line	embryonic stem cell
6	chr14:65039000-65041800	Enhancers	Brain Substantia Nigra	brain
7	chr14:65039200-65041600	Enhancers	Fetal Muscle Leg	muscle
8	chr14:65040200-65041800	Enhancers	Brain Anterior Caudate	brain
9	chr14:65040200-65041800	Enhancers	Brain Cingulate Gyrus	brain
10	chr14:65040200-65047200	Weak transcription	Psoas Muscle	Psoas
11	chr14:65040200-65047400	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr14:65040200-65047800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr14:65040200-65048000	Weak transcription	H9 Cell Line	embryonic stem cell
14	chr14:65040200-65051200	Weak transcription	Stomach Smooth Muscle	stomach
15	chr14:65040200-65058000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr14:65040400-65047200	Weak transcription	Rectal Smooth Muscle	rectum
17	chr14:65040400-65048000	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr14:65040800-65041800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
19	chr14:65041000-65041600	Weak transcription	Brain Hippocampus Middle	brain
20	chr14:65041000-65041600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
21	chr14:65041200-65041400	Enhancers	Fetal Lung	lung
22	chr14:65041200-65045200	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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