Variant report

Variant	rs74056451
Chromosome Location	chr14:64988158-64988159
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:64988143..64990019-chr14:65005055..65006993,2	MCF-7	breast:
2	chr14:64986499..64988799-chr14:64989705..64991452,2	MCF-7	breast:
3	chr14:64972191..64974986-chr14:64988003..64989901,3	MCF-7	breast:
4	chr14:64981930..64983904-chr14:64987033..64989897,3	MCF-7	breast:
5	chr14:64987035..64989680-chr14:64995490..64997427,2	MCF-7	breast:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10130553	1.00[AMR][1000 genomes]
rs10133196	1.00[AMR][1000 genomes]
rs10135368	1.00[AMR][1000 genomes]
rs12101185	1.00[AMR][1000 genomes]
rs17101973	1.00[AMR][1000 genomes]
rs41381946	1.00[AMR][1000 genomes]
rs41456047	1.00[AMR][1000 genomes]
rs55845128	1.00[AMR][1000 genomes]
rs58703532	1.00[AMR][1000 genomes]
rs73271700	1.00[AMR][1000 genomes]
rs74056321	1.00[AMR][1000 genomes]
rs74056335	1.00[AMR][1000 genomes]
rs74056355	1.00[AMR][1000 genomes]
rs74056368	1.00[AMR][1000 genomes]
rs74056389	1.00[AMR][1000 genomes]
rs74056393	1.00[AMR][1000 genomes]
rs74056398	1.00[AMR][1000 genomes]
rs74056399	1.00[AMR][1000 genomes]
rs74056402	1.00[AMR][1000 genomes]
rs74056453	1.00[AMR][1000 genomes]
rs74056462	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv521823	chr14:64969342-64995694	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	56 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64972800-64988400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr14:64972800-64991600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr14:64974400-64988200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr14:64974400-64988400	Weak transcription	Stomach Smooth Muscle	stomach
5	chr14:64974800-64988600	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr14:64974800-64999400	Weak transcription	Fetal Brain Male	brain
7	chr14:64974800-65006000	Weak transcription	Ovary	ovary
8	chr14:64975000-64988400	Weak transcription	HSMMtube	muscle
9	chr14:64975200-64988200	Weak transcription	Fetal Muscle Leg	muscle
10	chr14:64975200-64988600	Weak transcription	Fetal Stomach	stomach
11	chr14:64976000-64988400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr14:64976000-64995400	Weak transcription	Gastric	stomach
13	chr14:64976000-64996600	Weak transcription	Esophagus	oesophagus
14	chr14:64976000-65006000	Weak transcription	Brain Germinal Matrix	brain
15	chr14:64976200-64988200	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr14:64976200-64988200	Weak transcription	Fetal Intestine Large	intestine
17	chr14:64976200-64988200	Weak transcription	Placenta	Placenta
18	chr14:64976200-64988600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr14:64976200-64991800	Weak transcription	Stomach Mucosa	stomach
20	chr14:64977600-64988200	Weak transcription	Right Ventricle	heart
21	chr14:64977800-64988400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
22	chr14:64977800-64991600	Weak transcription	Placenta Amnion	Placenta Amnion
23	chr14:64977800-64992200	Weak transcription	Colonic Mucosa	Colon
24	chr14:64977800-64993600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
25	chr14:64978000-64988600	Weak transcription	Fetal Kidney	kidney
26	chr14:64978200-64988200	Weak transcription	HUES6 Cell Line	embryonic stem cell
27	chr14:64978200-64988200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
28	chr14:64978200-64988400	Weak transcription	HUES48 Cell Line	embryonic stem cell
29	chr14:64978200-64988400	Weak transcription	Fetal Lung	lung
30	chr14:64978200-64989400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr14:64978200-65006000	Weak transcription	Brain Cingulate Gyrus	brain
32	chr14:64978400-64988400	Weak transcription	Rectal Mucosa Donor 29	rectum
33	chr14:64978400-64988400	Weak transcription	HepG2	liver
34	chr14:64978400-64988600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
35	chr14:64978400-64992200	Weak transcription	Brain Inferior Temporal Lobe	brain
36	chr14:64978400-64992600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
37	chr14:64978600-64988200	Weak transcription	Primary hematopoietic stem cells	blood
38	chr14:64978600-64996200	Weak transcription	Brain Angular Gyrus	brain
39	chr14:64978800-64988200	Weak transcription	Primary monocytes fromperipheralblood	blood
40	chr14:64979200-64988200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
41	chr14:64979200-64988200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr14:64979200-64988200	Weak transcription	Duodenum Mucosa	Duodenum
43	chr14:64979200-64988200	Weak transcription	Duodenum Smooth Muscle	Duodenum
44	chr14:64979200-64988200	Weak transcription	HMEC	breast
45	chr14:64979200-64988800	Weak transcription	Spleen	Spleen
46	chr14:64979200-65005800	Weak transcription	Brain Anterior Caudate	brain
47	chr14:64979400-64988200	Weak transcription	Primary B cells from cord blood	blood
48	chr14:64979400-64988200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr14:64979600-64988400	Weak transcription	NH-A	brain
50	chr14:64979800-64988200	Weak transcription	Liver	Liver

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