Variant report

Variant	rs10134645
Chromosome Location	chr14:32831968-32831969
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10131297	0.80[ASN][1000 genomes]
rs10135655	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10136107	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10137128	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10148659	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10150678	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10151749	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10151983	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10151990	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10431652	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10483397	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1951688	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28656103	0.81[ASN][1000 genomes]
rs3784171	0.81[ASN][1000 genomes]
rs3784173	0.84[EUR][1000 genomes]
rs7141313	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7146944	0.81[ASN][1000 genomes]
rs7148165	0.83[EUR][1000 genomes]
rs7149335	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7160178	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs717616	0.81[ASN][1000 genomes]
rs8020364	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9322897	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9322898	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32819200-32834200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:32822400-32834400	Weak transcription	Fetal Brain Female	brain
3	chr14:32828000-32835200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr14:32828200-32833400	Weak transcription	Brain Germinal Matrix	brain
5	chr14:32830400-32835000	Enhancers	Brain Anterior Caudate	brain
6	chr14:32830600-32833400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
7	chr14:32830600-32840400	Enhancers	Brain Cingulate Gyrus	brain
8	chr14:32830600-32843800	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr14:32830800-32835600	Weak transcription	H1 Cell Line	embryonic stem cell
10	chr14:32831000-32835400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
11	chr14:32831000-32838000	Enhancers	Brain Angular Gyrus	brain
12	chr14:32831400-32834400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr14:32831400-32835000	Enhancers	Brain Hippocampus Middle	brain
14	chr14:32831400-32835200	Enhancers	Brain Substantia Nigra	brain
15	chr14:32831600-32833200	Enhancers	Right Atrium	heart
16	chr14:32831600-32834200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
17	chr14:32831600-32834600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr14:32831600-32834800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr14:32831600-32835200	Weak transcription	HUES64 Cell Line	embryonic stem cell
20	chr14:32831800-32832000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr14:32831800-32832200	Enhancers	Left Ventricle	heart
22	chr14:32831800-32835200	Enhancers	Brain Inferior Temporal Lobe	brain

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