Variant report

Variant	rs10148659
Chromosome Location	chr14:32820586-32820587
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs10129967	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10131297	0.86[ASN][1000 genomes]
rs10132146	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10134645	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10135655	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10136107	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10136452	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10137128	0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10137450	0.84[ASN][1000 genomes]
rs10139496	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10140526	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10143009	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10143442	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10150678	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10151749	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10151983	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10151990	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10220343	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10431652	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10483397	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12050081	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12717220	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12889258	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12891932	0.84[ASN][1000 genomes]
rs12896756	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17098849	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17098889	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1951688	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1951690	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1998429	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs28451992	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs28563822	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs28599717	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs28656103	0.87[ASN][1000 genomes]
rs3784167	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3784171	0.87[ASN][1000 genomes]
rs66517744	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7141313	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7146034	0.83[AMR][1000 genomes]
rs7146562	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7146944	0.87[ASN][1000 genomes]
rs7147285	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7148036	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7148165	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7149335	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7151681	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7153398	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7160178	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs717616	0.87[ASN][1000 genomes]
rs8017400	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs8020364	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9322897	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9322898	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32797200-32831600	Weak transcription	Right Atrium	heart
2	chr14:32803200-32821600	Weak transcription	Fetal Brain Female	brain
3	chr14:32814000-32827800	Weak transcription	Brain Germinal Matrix	brain
4	chr14:32814800-32824000	Weak transcription	Aorta	Aorta
5	chr14:32815000-32823600	Weak transcription	Brain Anterior Caudate	brain
6	chr14:32815000-32827000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr14:32815200-32823600	Weak transcription	Brain Angular Gyrus	brain
8	chr14:32815400-32821800	Weak transcription	Brain Substantia Nigra	brain
9	chr14:32815400-32825600	Weak transcription	Brain Cingulate Gyrus	brain
10	chr14:32817000-32824000	Weak transcription	Gastric	stomach
11	chr14:32818400-32823800	Weak transcription	Brain Inferior Temporal Lobe	brain
12	chr14:32819200-32834200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr14:32819400-32820600	Weak transcription	NHEK	skin
14	chr14:32819400-32820800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr14:32820400-32822400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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