Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:81030392..81031930-chr14:81036761..81039029,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10135604	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10138431	0.92[EUR][1000 genomes]
rs10140845	0.90[EUR][1000 genomes]
rs10145319	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12587285	0.82[ASN][1000 genomes]
rs12878113	1.00[ASN][1000 genomes]
rs12881248	1.00[ASN][1000 genomes]
rs34019777	0.85[ASN][1000 genomes]
rs34489190	0.88[ASN][1000 genomes]
rs34536975	0.82[ASN][1000 genomes]
rs34946091	0.83[ASN][1000 genomes]
rs35038680	0.82[ASN][1000 genomes]
rs35426127	0.82[ASN][1000 genomes]
rs35930082	0.82[ASN][1000 genomes]
rs55670336	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs61981704	0.82[ASN][1000 genomes]
rs67116258	0.82[ASN][1000 genomes]
rs8005242	0.92[EUR][1000 genomes]
rs8016151	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8017175	1.00[ASN][1000 genomes]
rs9323688	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv902116	chr14:81018237-81082400	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81028400-81033400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:81029600-81044800	Weak transcription	Dnd41	blood
3	chr14:81031000-81032000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr14:81031000-81032000	Enhancers	Placenta	Placenta
5	chr14:81031400-81031800	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr14:81031400-81032000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr14:81031400-81032000	Enhancers	H9 Cell Line	embryonic stem cell
8	chr14:81031400-81032200	Enhancers	iPS-20b Cell Line	embryonic stem cell
9	chr14:81031400-81032400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr14:81031600-81032000	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr14:81031600-81032400	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr14:81031600-81032600	Enhancers	iPS-18 Cell Line	embryonic stem cell

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