Variant report

Variant	rs35426127
Chromosome Location	chr14:81065767-81065768
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10135604	0.94[ASN][1000 genomes]
rs10139763	0.82[EUR][1000 genomes]
rs10145319	0.98[ASN][1000 genomes]
rs10149210	0.82[ASN][1000 genomes]
rs11844022	0.83[AFR][1000 genomes]
rs11844906	0.86[EUR][1000 genomes]
rs11845635	0.81[AFR][1000 genomes]
rs11850128	0.80[AFR][1000 genomes]
rs12587285	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12878113	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12881248	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17110851	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17110854	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17110914	0.86[EUR][1000 genomes]
rs17110926	0.87[EUR][1000 genomes]
rs34019777	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34481438	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34489190	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34536975	0.83[EUR][1000 genomes]
rs34946091	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35038680	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35505520	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35930082	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56256007	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61979379	0.87[EUR][1000 genomes]
rs61981704	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61981706	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6574594	0.87[EUR][1000 genomes]
rs67116258	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7144224	0.83[EUR][1000 genomes]
rs7149459	0.87[EUR][1000 genomes]
rs8016151	0.94[ASN][1000 genomes]
rs8017175	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv902116	chr14:81018237-81082400	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81052400-81070000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr14:81062200-81082200	Weak transcription	Dnd41	blood

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