Variant report
Variant | rs8017175 |
---|---|
Chromosome Location | chr14:81030993-81030994 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:81030392..81031930-chr14:81036761..81039029,2 | MCF-7 | breast: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10135604 | 0.85[ASN][1000 genomes] |
rs10139763 | 0.81[EUR][1000 genomes] |
rs10145319 | 0.85[ASN][1000 genomes] |
rs10149210 | 1.00[ASN][1000 genomes] |
rs10498544 | 0.91[EUR][1000 genomes] |
rs11844906 | 0.85[EUR][1000 genomes] |
rs12587285 | 0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs12878113 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12881248 | 0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12886241 | 0.91[EUR][1000 genomes] |
rs17110851 | 0.88[EUR][1000 genomes] |
rs17110854 | 0.88[EUR][1000 genomes] |
rs17110914 | 0.85[EUR][1000 genomes] |
rs17110926 | 0.86[EUR][1000 genomes] |
rs2290168 | 0.90[EUR][1000 genomes] |
rs34019777 | 0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs34481438 | 0.84[EUR][1000 genomes] |
rs34489190 | 0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs34536975 | 0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs34946091 | 0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs35038680 | 0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs35426127 | 0.84[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs35505520 | 0.88[EUR][1000 genomes] |
rs35817733 | 0.90[EUR][1000 genomes] |
rs35930082 | 0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs56256007 | 0.85[EUR][1000 genomes] |
rs61979379 | 0.86[EUR][1000 genomes] |
rs61981704 | 0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs61981706 | 0.88[EUR][1000 genomes] |
rs6574594 | 0.86[EUR][1000 genomes] |
rs67116258 | 0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7144224 | 0.82[EUR][1000 genomes] |
rs7149459 | 0.86[EUR][1000 genomes] |
rs8016151 | 0.88[ASN][1000 genomes] |
rs9323688 | 0.95[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv869348 | chr14:80921098-81535754 | Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
2 | nsv902116 | chr14:81018237-81082400 | Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:81028400-81033400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
2 | chr14:81029600-81044800 | Weak transcription | Dnd41 | blood |
3 | chr14:81030600-81031400 | Enhancers | Placenta Amnion | Placenta Amnion |