Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10135604	0.84[JPT][hapmap]
rs10138431	0.90[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10140845	0.80[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10148083	0.91[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10498544	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11844906	0.83[CEU][hapmap]
rs11847660	0.93[ASN][1000 genomes]
rs12587285	0.82[EUR][1000 genomes]
rs12878113	0.86[CEU][hapmap];0.84[JPT][hapmap];0.90[EUR][1000 genomes]
rs12881248	0.86[CEU][hapmap];0.90[EUR][1000 genomes]
rs12886241	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17110851	0.81[CEU][hapmap]
rs17110854	0.81[CEU][hapmap]
rs17110914	0.81[CEU][hapmap]
rs17110926	0.81[CEU][hapmap]
rs34019777	0.81[EUR][1000 genomes]
rs34489190	0.84[EUR][1000 genomes]
rs34536975	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34946091	0.81[EUR][1000 genomes]
rs35038680	0.81[EUR][1000 genomes]
rs35505520	0.80[EUR][1000 genomes]
rs35817733	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35930082	0.82[EUR][1000 genomes]
rs61981704	0.82[EUR][1000 genomes]
rs67116258	0.81[EUR][1000 genomes]
rs7160604	0.85[CHB][hapmap];0.95[JPT][hapmap];0.96[ASN][1000 genomes]
rs8005242	0.83[ASN][1000 genomes]
rs8016151	0.84[JPT][hapmap]
rs8017175	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81002000-81010000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr14:81003400-81015600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr14:81009000-81012600	Weak transcription	Dnd41	blood
4	chr14:81009600-81010200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr14:81009600-81010400	Enhancers	Brain Substantia Nigra	brain

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