Variant report

Variant	rs10159871
Chromosome Location	chr10:117421953-117421954
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:117191105..117195463-chr10:117420913..117426714,6	MCF-7	breast:
2	chr10:117421922..117426738-chr10:118029983..118035874,10	MCF-7	breast:
3	chr10:117421405..117427759-chr10:118027934..118034540,13	MCF-7	breast:

Variant related genes	Relation type
ENSG00000151892	Chromatin interaction

rs_ID	r²[population]
rs10159493	1.00[AFR][1000 genomes]
rs10159500	0.94[AFR][1000 genomes]
rs10159881	0.94[AFR][1000 genomes]
rs10160074	1.00[AFR][1000 genomes]
rs11197348	0.84[AFR][1000 genomes]
rs11197349	0.84[AFR][1000 genomes]
rs11197350	0.84[AFR][1000 genomes]
rs11197354	0.84[AFR][1000 genomes]
rs11197356	0.84[AFR][1000 genomes]
rs11197370	0.86[AFR][1000 genomes]
rs11197378	0.94[AFR][1000 genomes]
rs11197379	0.94[AFR][1000 genomes]
rs11197380	0.94[AFR][1000 genomes]
rs11197381	0.94[AFR][1000 genomes]
rs11197386	0.94[AFR][1000 genomes]
rs11197387	0.94[AFR][1000 genomes]
rs11197388	0.94[AFR][1000 genomes]
rs11197389	0.94[AFR][1000 genomes]
rs11197390	0.94[AFR][1000 genomes]
rs11197391	0.94[AFR][1000 genomes]
rs11197393	0.94[AFR][1000 genomes]
rs11197394	0.88[AFR][1000 genomes]
rs11197395	0.94[AFR][1000 genomes]
rs12240499	0.94[AFR][1000 genomes]
rs12240928	0.86[AFR][1000 genomes]
rs12245317	0.84[AFR][1000 genomes]
rs12245412	0.94[AFR][1000 genomes]
rs12245465	0.94[AFR][1000 genomes]
rs12246227	0.94[AFR][1000 genomes]
rs12246242	0.94[AFR][1000 genomes]
rs12246295	0.94[AFR][1000 genomes]
rs12246358	0.90[AFR][1000 genomes]
rs12246470	0.94[AFR][1000 genomes]
rs12249348	0.84[AFR][1000 genomes]
rs12252733	0.91[AFR][1000 genomes]
rs12252981	0.94[AFR][1000 genomes]
rs12253056	0.94[AFR][1000 genomes]
rs12254841	0.94[AFR][1000 genomes]
rs12255030	0.94[AFR][1000 genomes]
rs12257186	0.86[AFR][1000 genomes]
rs12257254	0.86[AFR][1000 genomes]
rs12260891	0.94[AFR][1000 genomes]
rs12261137	0.90[AFR][1000 genomes]
rs12261191	0.94[AFR][1000 genomes]
rs12261328	0.90[AFR][1000 genomes]
rs12262956	0.94[AFR][1000 genomes]
rs12265922	0.94[AFR][1000 genomes]
rs12266544	0.81[AFR][1000 genomes]
rs12267791	0.94[AFR][1000 genomes]
rs12267941	0.84[AFR][1000 genomes]
rs12269447	0.94[AFR][1000 genomes]
rs28773857	0.84[AFR][1000 genomes]
rs56032448	1.00[AFR][1000 genomes]
rs56158529	0.90[AFR][1000 genomes]
rs57352585	0.94[AFR][1000 genomes]
rs59118492	0.84[AFR][1000 genomes]
rs59377038	1.00[AFR][1000 genomes]
rs60160808	0.94[AFR][1000 genomes]
rs7084607	0.94[AFR][1000 genomes]
rs7089047	0.94[AFR][1000 genomes]
rs74158210	0.94[AFR][1000 genomes]
rs74158212	0.94[AFR][1000 genomes]
rs74158213	0.94[AFR][1000 genomes]
rs74158214	0.94[AFR][1000 genomes]
rs74158215	0.94[AFR][1000 genomes]
rs74158216	0.88[AFR][1000 genomes]
rs74158217	0.94[AFR][1000 genomes]
rs74158218	1.00[AFR][1000 genomes]
rs74158220	0.94[AFR][1000 genomes]
rs74158221	1.00[AFR][1000 genomes]
rs74158222	0.94[AFR][1000 genomes]
rs74158223	0.94[AFR][1000 genomes]
rs74158231	0.94[AFR][1000 genomes]
rs74158232	0.94[AFR][1000 genomes]
rs74158234	0.88[AFR][1000 genomes]
rs74158235	0.88[AFR][1000 genomes]
rs74158237	0.88[AFR][1000 genomes]
rs74158238	0.88[AFR][1000 genomes]
rs74158239	0.86[AFR][1000 genomes]
rs74158240	0.83[AFR][1000 genomes]
rs74158242	0.86[AFR][1000 genomes]
rs74158243	0.86[AFR][1000 genomes]
rs74158244	0.86[AFR][1000 genomes]
rs74158245	0.86[AFR][1000 genomes]
rs74158246	0.86[AFR][1000 genomes]
rs74158247	0.86[AFR][1000 genomes]
rs74158401	0.84[AFR][1000 genomes]
rs74161605	0.84[AFR][1000 genomes]
rs74161606	0.84[AFR][1000 genomes]
rs74161607	0.84[AFR][1000 genomes]
rs74161608	0.84[AFR][1000 genomes]
rs74161609	0.84[AFR][1000 genomes]
rs74161610	0.84[AFR][1000 genomes]
rs74161621	0.94[AFR][1000 genomes]

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117421000-117423200	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr10:117421200-117423200	Weak transcription	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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