Variant report
| Variant | rs12245317 |
|---|---|
| Chromosome Location | chr10:117376461-117376462 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:96)
| rs_ID | r2[population] |
|---|---|
| rs10159493 | 0.84[AFR][1000 genomes] |
| rs10159500 | 0.91[AFR][1000 genomes] |
| rs10159871 | 0.84[AFR][1000 genomes] |
| rs10159881 | 0.91[AFR][1000 genomes] |
| rs10160074 | 0.84[AFR][1000 genomes] |
| rs11197347 | 0.84[AFR][1000 genomes] |
| rs11197348 | 1.00[AFR][1000 genomes] |
| rs11197349 | 1.00[AFR][1000 genomes] |
| rs11197350 | 1.00[AFR][1000 genomes] |
| rs11197354 | 1.00[AFR][1000 genomes] |
| rs11197356 | 1.00[AFR][1000 genomes] |
| rs11197370 | 0.83[AFR][1000 genomes] |
| rs11197378 | 0.91[AFR][1000 genomes] |
| rs11197379 | 0.91[AFR][1000 genomes] |
| rs11197380 | 0.91[AFR][1000 genomes] |
| rs11197381 | 0.91[AFR][1000 genomes] |
| rs11197386 | 0.91[AFR][1000 genomes] |
| rs11197387 | 0.91[AFR][1000 genomes] |
| rs11197388 | 0.91[AFR][1000 genomes] |
| rs11197389 | 0.91[AFR][1000 genomes] |
| rs11197390 | 0.91[AFR][1000 genomes] |
| rs11197391 | 0.91[AFR][1000 genomes] |
| rs11197393 | 0.91[AFR][1000 genomes] |
| rs11197394 | 0.85[AFR][1000 genomes] |
| rs11197395 | 0.91[AFR][1000 genomes] |
| rs12240499 | 0.91[AFR][1000 genomes] |
| rs12240928 | 0.83[AFR][1000 genomes] |
| rs12245412 | 0.91[AFR][1000 genomes] |
| rs12245465 | 0.91[AFR][1000 genomes] |
| rs12246227 | 0.91[AFR][1000 genomes] |
| rs12246242 | 0.91[AFR][1000 genomes] |
| rs12246295 | 0.91[AFR][1000 genomes] |
| rs12246358 | 0.94[AFR][1000 genomes] |
| rs12246470 | 0.91[AFR][1000 genomes] |
| rs12247972 | 0.94[AFR][1000 genomes] |
| rs12249348 | 1.00[AFR][1000 genomes] |
| rs12252733 | 0.88[AFR][1000 genomes] |
| rs12252981 | 0.91[AFR][1000 genomes] |
| rs12253056 | 0.91[AFR][1000 genomes] |
| rs12254841 | 0.91[AFR][1000 genomes] |
| rs12255030 | 0.91[AFR][1000 genomes] |
| rs12257164 | 0.88[AFR][1000 genomes] |
| rs12257186 | 0.83[AFR][1000 genomes] |
| rs12257254 | 0.83[AFR][1000 genomes] |
| rs12260891 | 0.91[AFR][1000 genomes] |
| rs12261137 | 0.94[AFR][1000 genomes] |
| rs12261191 | 0.91[AFR][1000 genomes] |
| rs12261328 | 0.94[AFR][1000 genomes] |
| rs12262956 | 0.91[AFR][1000 genomes] |
| rs12265922 | 0.91[AFR][1000 genomes] |
| rs12267791 | 0.91[AFR][1000 genomes] |
| rs12267941 | 1.00[AFR][1000 genomes] |
| rs12269447 | 0.91[AFR][1000 genomes] |
| rs28773857 | 1.00[AFR][1000 genomes] |
| rs56032448 | 0.84[AFR][1000 genomes] |
| rs56158529 | 0.94[AFR][1000 genomes] |
| rs57352585 | 0.91[AFR][1000 genomes] |
| rs59118492 | 1.00[AFR][1000 genomes] |
| rs59377038 | 0.84[AFR][1000 genomes] |
| rs60160808 | 0.91[AFR][1000 genomes] |
| rs7084607 | 0.91[AFR][1000 genomes] |
| rs7089047 | 0.91[AFR][1000 genomes] |
| rs74158210 | 0.91[AFR][1000 genomes] |
| rs74158212 | 0.91[AFR][1000 genomes] |
| rs74158213 | 0.91[AFR][1000 genomes] |
| rs74158214 | 0.91[AFR][1000 genomes] |
| rs74158215 | 0.91[AFR][1000 genomes] |
| rs74158216 | 0.85[AFR][1000 genomes] |
| rs74158217 | 0.91[AFR][1000 genomes] |
| rs74158218 | 0.84[AFR][1000 genomes] |
| rs74158220 | 0.91[AFR][1000 genomes] |
| rs74158221 | 0.84[AFR][1000 genomes] |
| rs74158222 | 0.91[AFR][1000 genomes] |
| rs74158223 | 0.91[AFR][1000 genomes] |
| rs74158231 | 0.91[AFR][1000 genomes] |
| rs74158232 | 0.91[AFR][1000 genomes] |
| rs74158234 | 0.85[AFR][1000 genomes] |
| rs74158235 | 0.85[AFR][1000 genomes] |
| rs74158237 | 0.85[AFR][1000 genomes] |
| rs74158238 | 0.85[AFR][1000 genomes] |
| rs74158239 | 0.83[AFR][1000 genomes] |
| rs74158240 | 0.80[AFR][1000 genomes] |
| rs74158242 | 0.83[AFR][1000 genomes] |
| rs74158243 | 0.83[AFR][1000 genomes] |
| rs74158244 | 0.83[AFR][1000 genomes] |
| rs74158245 | 0.83[AFR][1000 genomes] |
| rs74158246 | 0.83[AFR][1000 genomes] |
| rs74158247 | 0.83[AFR][1000 genomes] |
| rs74158401 | 1.00[AFR][1000 genomes] |
| rs74161605 | 1.00[AFR][1000 genomes] |
| rs74161606 | 1.00[AFR][1000 genomes] |
| rs74161607 | 1.00[AFR][1000 genomes] |
| rs74161608 | 1.00[AFR][1000 genomes] |
| rs74161609 | 1.00[AFR][1000 genomes] |
| rs74161610 | 1.00[AFR][1000 genomes] |
| rs74161621 | 0.91[AFR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:117375800-117376600 | ZNF genes & repeats | Aorta | Aorta |
| 2 | chr10:117376000-117376600 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 3 | chr10:117376200-117376800 | ZNF genes & repeats | Ovary | ovary |
