Variant report

Variant	rs12240928
Chromosome Location	chr10:117434104-117434105
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:117432891..117435605-chr10:117901263..117903123,2	MCF-7	breast:

rs_ID	r²[population]
rs10159493	0.86[AFR][1000 genomes]
rs10159500	0.91[AFR][1000 genomes]
rs10159871	0.86[AFR][1000 genomes]
rs10159881	0.91[AFR][1000 genomes]
rs10160074	0.86[AFR][1000 genomes]
rs11197263	1.00[YRI][hapmap]
rs11197296	1.00[YRI][hapmap]
rs11197348	0.83[AFR][1000 genomes]
rs11197349	0.83[AFR][1000 genomes]
rs11197350	0.83[AFR][1000 genomes]
rs11197354	0.83[AFR][1000 genomes]
rs11197356	0.83[AFR][1000 genomes]
rs11197370	0.83[AFR][1000 genomes]
rs11197378	0.91[AFR][1000 genomes]
rs11197379	0.91[AFR][1000 genomes]
rs11197380	0.91[AFR][1000 genomes]
rs11197381	0.91[AFR][1000 genomes]
rs11197386	0.91[AFR][1000 genomes]
rs11197387	0.91[AFR][1000 genomes]
rs11197388	0.91[AFR][1000 genomes]
rs11197389	0.91[AFR][1000 genomes]
rs11197390	0.91[AFR][1000 genomes]
rs11197391	0.91[AFR][1000 genomes]
rs11197393	0.91[AFR][1000 genomes]
rs11197394	0.86[AFR][1000 genomes]
rs11197395	0.91[AFR][1000 genomes]
rs11197402	0.91[AFR][1000 genomes]
rs11197403	0.91[AFR][1000 genomes]
rs11197404	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs11197405	0.91[AFR][1000 genomes]
rs11197406	0.91[AFR][1000 genomes]
rs12240499	0.91[AFR][1000 genomes]
rs12244846	0.86[AFR][1000 genomes]
rs12245110	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12245229	0.91[AFR][1000 genomes]
rs12245317	0.83[AFR][1000 genomes]
rs12245412	0.91[AFR][1000 genomes]
rs12245465	0.91[AFR][1000 genomes]
rs12245971	1.00[YRI][hapmap]
rs12246227	0.91[AFR][1000 genomes]
rs12246242	0.91[AFR][1000 genomes]
rs12246295	0.91[AFR][1000 genomes]
rs12246358	0.88[AFR][1000 genomes]
rs12246470	0.91[AFR][1000 genomes]
rs12248834	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12249141	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12249348	0.83[AFR][1000 genomes]
rs12252706	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12252733	0.88[AFR][1000 genomes]
rs12252772	0.91[AFR][1000 genomes]
rs12252900	0.91[AFR][1000 genomes]
rs12252981	0.91[AFR][1000 genomes]
rs12253056	0.91[AFR][1000 genomes]
rs12254841	0.91[AFR][1000 genomes]
rs12255030	0.91[AFR][1000 genomes]
rs12256635	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12257186	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs12257254	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs12257990	1.00[YRI][hapmap]
rs12258300	1.00[YRI][hapmap]
rs12260062	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12260891	0.91[AFR][1000 genomes]
rs12261137	0.88[AFR][1000 genomes]
rs12261191	0.91[AFR][1000 genomes]
rs12261328	0.88[AFR][1000 genomes]
rs12261735	0.91[AFR][1000 genomes]
rs12262956	0.91[AFR][1000 genomes]
rs12264880	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12264898	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12265922	0.91[AFR][1000 genomes]
rs12267217	1.00[YRI][hapmap];0.83[AFR][1000 genomes]
rs12267791	0.91[AFR][1000 genomes]
rs12267941	0.83[AFR][1000 genomes]
rs12269447	0.91[AFR][1000 genomes]
rs13377136	1.00[YRI][hapmap]
rs28773857	0.83[AFR][1000 genomes]
rs56032448	0.86[AFR][1000 genomes]
rs56158529	0.88[AFR][1000 genomes]
rs57352585	0.91[AFR][1000 genomes]
rs59118492	0.83[AFR][1000 genomes]
rs59377038	0.86[AFR][1000 genomes]
rs60031269	0.91[AFR][1000 genomes]
rs60160808	0.91[AFR][1000 genomes]
rs61707910	0.91[AFR][1000 genomes]
rs7084607	0.91[AFR][1000 genomes]
rs7089047	0.91[AFR][1000 genomes]
rs7089941	1.00[YRI][hapmap]
rs74158210	0.91[AFR][1000 genomes]
rs74158212	0.91[AFR][1000 genomes]
rs74158213	0.91[AFR][1000 genomes]
rs74158214	0.91[AFR][1000 genomes]
rs74158215	0.91[AFR][1000 genomes]
rs74158216	0.86[AFR][1000 genomes]
rs74158217	0.91[AFR][1000 genomes]
rs74158218	0.86[AFR][1000 genomes]
rs74158220	0.91[AFR][1000 genomes]
rs74158221	0.86[AFR][1000 genomes]
rs74158222	0.91[AFR][1000 genomes]
rs74158223	0.91[AFR][1000 genomes]
rs74158231	0.91[AFR][1000 genomes]
rs74158232	0.91[AFR][1000 genomes]
rs74158234	0.97[AFR][1000 genomes]
rs74158235	0.97[AFR][1000 genomes]
rs74158237	0.97[AFR][1000 genomes]
rs74158238	0.97[AFR][1000 genomes]
rs74158239	1.00[AFR][1000 genomes]
rs74158240	0.97[AFR][1000 genomes]
rs74158242	1.00[AFR][1000 genomes]
rs74158243	1.00[AFR][1000 genomes]
rs74158244	1.00[AFR][1000 genomes]
rs74158245	1.00[AFR][1000 genomes]
rs74158246	1.00[AFR][1000 genomes]
rs74158247	1.00[AFR][1000 genomes]
rs74158248	0.91[AFR][1000 genomes]
rs74158249	0.91[AFR][1000 genomes]
rs74158250	0.91[AFR][1000 genomes]
rs74158252	0.91[AFR][1000 genomes]
rs74158257	0.91[AFR][1000 genomes]
rs74158401	0.83[AFR][1000 genomes]
rs74161605	0.83[AFR][1000 genomes]
rs74161606	0.83[AFR][1000 genomes]
rs74161607	0.83[AFR][1000 genomes]
rs74161608	0.83[AFR][1000 genomes]
rs74161609	0.83[AFR][1000 genomes]
rs74161610	0.83[AFR][1000 genomes]
rs74161621	0.91[AFR][1000 genomes]

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117432800-117440600	Weak transcription	Aorta	Aorta
2	chr10:117433600-117434800	Enhancers	Muscle Satellite Cultured Cells	--
3	chr10:117433600-117435200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr10:117433800-117434600	Weak transcription	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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