Variant report
| Variant | rs11197263 |
|---|---|
| Chromosome Location | chr10:117279695-117279696 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:82)
| rs_ID | r2[population] |
|---|---|
| rs10160059 | 1.00[AMR][1000 genomes] |
| rs10218965 | 1.00[AMR][1000 genomes] |
| rs11197169 | 1.00[AMR][1000 genomes] |
| rs11197179 | 1.00[AMR][1000 genomes] |
| rs11197202 | 1.00[AMR][1000 genomes] |
| rs11197215 | 1.00[AMR][1000 genomes] |
| rs11197226 | 1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs11197245 | 1.00[YRI][hapmap];1.00[AMR][1000 genomes] |
| rs11197251 | 1.00[YRI][hapmap] |
| rs11197262 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs11197291 | 1.00[YRI][hapmap] |
| rs11197296 | 1.00[YRI][hapmap] |
| rs11197304 | 1.00[YRI][hapmap] |
| rs11197348 | 1.00[YRI][hapmap] |
| rs11197349 | 1.00[YRI][hapmap] |
| rs11197351 | 1.00[YRI][hapmap] |
| rs11197352 | 1.00[YRI][hapmap] |
| rs11197370 | 1.00[YRI][hapmap] |
| rs11197386 | 1.00[YRI][hapmap] |
| rs11197391 | 1.00[YRI][hapmap] |
| rs11197393 | 1.00[YRI][hapmap] |
| rs11197404 | 1.00[YRI][hapmap] |
| rs11814391 | 1.00[AMR][1000 genomes] |
| rs11814707 | 1.00[AMR][1000 genomes] |
| rs11815135 | 1.00[AMR][1000 genomes] |
| rs11815570 | 1.00[AMR][1000 genomes] |
| rs11819600 | 1.00[AMR][1000 genomes] |
| rs12240499 | 1.00[YRI][hapmap] |
| rs12240928 | 1.00[YRI][hapmap] |
| rs12243983 | 1.00[YRI][hapmap] |
| rs12245110 | 1.00[YRI][hapmap] |
| rs12245250 | 1.00[YRI][hapmap] |
| rs12245494 | 1.00[YRI][hapmap] |
| rs12245971 | 1.00[YRI][hapmap] |
| rs12246358 | 1.00[YRI][hapmap] |
| rs12246781 | 1.00[YRI][hapmap] |
| rs12247539 | 1.00[YRI][hapmap] |
| rs12247872 | 1.00[YRI][hapmap] |
| rs12247960 | 1.00[AMR][1000 genomes] |
| rs12248297 | 1.00[AMR][1000 genomes] |
| rs12248813 | 1.00[YRI][hapmap] |
| rs12248834 | 1.00[YRI][hapmap] |
| rs12249141 | 1.00[YRI][hapmap] |
| rs12251569 | 1.00[YRI][hapmap];1.00[AMR][1000 genomes] |
| rs12252706 | 1.00[YRI][hapmap] |
| rs12252733 | 1.00[YRI][hapmap] |
| rs12253056 | 1.00[YRI][hapmap] |
| rs12253279 | 1.00[YRI][hapmap] |
| rs12253441 | 1.00[AMR][1000 genomes] |
| rs12255338 | 1.00[AMR][1000 genomes] |
| rs12256161 | 1.00[YRI][hapmap] |
| rs12256635 | 1.00[YRI][hapmap] |
| rs12256874 | 1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs12257186 | 1.00[YRI][hapmap] |
| rs12257254 | 1.00[YRI][hapmap] |
| rs12257990 | 1.00[YRI][hapmap] |
| rs12258177 | 1.00[AMR][1000 genomes] |
| rs12258619 | 1.00[YRI][hapmap] |
| rs12260062 | 1.00[YRI][hapmap] |
| rs12260269 | 1.00[AMR][1000 genomes] |
| rs12260896 | 1.00[YRI][hapmap] |
| rs12261137 | 1.00[YRI][hapmap] |
| rs12264087 | 1.00[AMR][1000 genomes] |
| rs12264880 | 1.00[YRI][hapmap] |
| rs12264898 | 1.00[YRI][hapmap] |
| rs12265574 | 1.00[YRI][hapmap] |
| rs12265922 | 1.00[YRI][hapmap] |
| rs12266411 | 1.00[AMR][1000 genomes] |
| rs12267100 | 1.00[YRI][hapmap] |
| rs12267242 | 1.00[YRI][hapmap] |
| rs12267791 | 1.00[YRI][hapmap] |
| rs12269265 | 1.00[AMR][1000 genomes] |
| rs12269430 | 1.00[YRI][hapmap] |
| rs13377136 | 1.00[YRI][hapmap] |
| rs56119142 | 1.00[AMR][1000 genomes] |
| rs7072224 | 1.00[YRI][hapmap] |
| rs7084607 | 1.00[YRI][hapmap] |
| rs7089047 | 1.00[YRI][hapmap] |
| rs7089941 | 1.00[YRI][hapmap] |
| rs74158241 | 1.00[AMR][1000 genomes] |
| rs74158363 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7921138 | 1.00[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:117278000-117281800 | Weak transcription | Aorta | Aorta |
| 2 | chr10:117278800-117280000 | Enhancers | Fetal Brain Male | brain |
