Variant report
| Variant | rs12246227 |
|---|---|
| Chromosome Location | chr10:117418875-117418876 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:119)
| rs_ID | r2[population] |
|---|---|
| rs10159493 | 0.94[AFR][1000 genomes] |
| rs10159500 | 1.00[AFR][1000 genomes] |
| rs10159871 | 0.94[AFR][1000 genomes] |
| rs10159881 | 1.00[AFR][1000 genomes] |
| rs10160074 | 0.94[AFR][1000 genomes] |
| rs11197348 | 0.91[AFR][1000 genomes] |
| rs11197349 | 0.91[AFR][1000 genomes] |
| rs11197350 | 0.91[AFR][1000 genomes] |
| rs11197354 | 0.91[AFR][1000 genomes] |
| rs11197356 | 0.91[AFR][1000 genomes] |
| rs11197370 | 0.91[AFR][1000 genomes] |
| rs11197378 | 1.00[AFR][1000 genomes] |
| rs11197379 | 1.00[AFR][1000 genomes] |
| rs11197380 | 1.00[AFR][1000 genomes] |
| rs11197381 | 1.00[AFR][1000 genomes] |
| rs11197386 | 1.00[AFR][1000 genomes] |
| rs11197387 | 1.00[AFR][1000 genomes] |
| rs11197388 | 1.00[AFR][1000 genomes] |
| rs11197389 | 1.00[AFR][1000 genomes] |
| rs11197390 | 1.00[AFR][1000 genomes] |
| rs11197391 | 1.00[AFR][1000 genomes] |
| rs11197393 | 1.00[AFR][1000 genomes] |
| rs11197394 | 0.94[AFR][1000 genomes] |
| rs11197395 | 1.00[AFR][1000 genomes] |
| rs11197402 | 0.82[AFR][1000 genomes] |
| rs11197403 | 0.82[AFR][1000 genomes] |
| rs11197404 | 0.82[AFR][1000 genomes] |
| rs11197405 | 0.82[AFR][1000 genomes] |
| rs11197406 | 0.82[AFR][1000 genomes] |
| rs12240499 | 1.00[AFR][1000 genomes] |
| rs12240928 | 0.91[AFR][1000 genomes] |
| rs12245110 | 0.82[AFR][1000 genomes] |
| rs12245229 | 0.82[AFR][1000 genomes] |
| rs12245317 | 0.91[AFR][1000 genomes] |
| rs12245412 | 1.00[AFR][1000 genomes] |
| rs12245465 | 1.00[AFR][1000 genomes] |
| rs12246242 | 1.00[AFR][1000 genomes] |
| rs12246295 | 1.00[AFR][1000 genomes] |
| rs12246358 | 0.97[AFR][1000 genomes] |
| rs12246470 | 1.00[AFR][1000 genomes] |
| rs12247972 | 0.84[AFR][1000 genomes] |
| rs12248834 | 0.82[AFR][1000 genomes] |
| rs12249141 | 0.82[AFR][1000 genomes] |
| rs12249348 | 0.91[AFR][1000 genomes] |
| rs12252706 | 0.82[AFR][1000 genomes] |
| rs12252733 | 0.97[AFR][1000 genomes] |
| rs12252772 | 0.82[AFR][1000 genomes] |
| rs12252900 | 0.82[AFR][1000 genomes] |
| rs12252981 | 1.00[AFR][1000 genomes] |
| rs12253056 | 1.00[AFR][1000 genomes] |
| rs12254841 | 1.00[AFR][1000 genomes] |
| rs12255030 | 1.00[AFR][1000 genomes] |
| rs12256635 | 0.82[AFR][1000 genomes] |
| rs12257164 | 0.80[AFR][1000 genomes] |
| rs12257186 | 0.91[AFR][1000 genomes] |
| rs12257254 | 0.91[AFR][1000 genomes] |
| rs12260062 | 0.82[AFR][1000 genomes] |
| rs12260891 | 1.00[AFR][1000 genomes] |
| rs12261137 | 0.97[AFR][1000 genomes] |
| rs12261191 | 1.00[AFR][1000 genomes] |
| rs12261328 | 0.97[AFR][1000 genomes] |
| rs12261735 | 0.82[AFR][1000 genomes] |
| rs12262956 | 1.00[AFR][1000 genomes] |
| rs12264880 | 0.82[AFR][1000 genomes] |
| rs12264898 | 0.82[AFR][1000 genomes] |
| rs12265922 | 1.00[AFR][1000 genomes] |
| rs12267791 | 1.00[AFR][1000 genomes] |
| rs12267941 | 0.91[AFR][1000 genomes] |
| rs12269447 | 1.00[AFR][1000 genomes] |
| rs28773857 | 0.91[AFR][1000 genomes] |
| rs56032448 | 0.94[AFR][1000 genomes] |
| rs56158529 | 0.97[AFR][1000 genomes] |
| rs57352585 | 1.00[AFR][1000 genomes] |
| rs59118492 | 0.91[AFR][1000 genomes] |
| rs59377038 | 0.94[AFR][1000 genomes] |
| rs60031269 | 0.82[AFR][1000 genomes] |
| rs60160808 | 1.00[AFR][1000 genomes] |
| rs61707910 | 0.82[AFR][1000 genomes] |
| rs7084607 | 1.00[AFR][1000 genomes] |
| rs7089047 | 1.00[AFR][1000 genomes] |
| rs74158210 | 1.00[AFR][1000 genomes] |
| rs74158212 | 1.00[AFR][1000 genomes] |
| rs74158213 | 1.00[AFR][1000 genomes] |
| rs74158214 | 1.00[AFR][1000 genomes] |
| rs74158215 | 1.00[AFR][1000 genomes] |
| rs74158216 | 0.94[AFR][1000 genomes] |
| rs74158217 | 1.00[AFR][1000 genomes] |
| rs74158218 | 0.94[AFR][1000 genomes] |
| rs74158220 | 1.00[AFR][1000 genomes] |
| rs74158221 | 0.94[AFR][1000 genomes] |
| rs74158222 | 1.00[AFR][1000 genomes] |
| rs74158223 | 1.00[AFR][1000 genomes] |
| rs74158231 | 1.00[AFR][1000 genomes] |
| rs74158232 | 1.00[AFR][1000 genomes] |
| rs74158234 | 0.94[AFR][1000 genomes] |
| rs74158235 | 0.94[AFR][1000 genomes] |
| rs74158237 | 0.94[AFR][1000 genomes] |
| rs74158238 | 0.94[AFR][1000 genomes] |
| rs74158239 | 0.91[AFR][1000 genomes] |
| rs74158240 | 0.89[AFR][1000 genomes] |
| rs74158242 | 0.91[AFR][1000 genomes] |
| rs74158243 | 0.91[AFR][1000 genomes] |
| rs74158244 | 0.91[AFR][1000 genomes] |
| rs74158245 | 0.91[AFR][1000 genomes] |
| rs74158246 | 0.91[AFR][1000 genomes] |
| rs74158247 | 0.91[AFR][1000 genomes] |
| rs74158248 | 0.82[AFR][1000 genomes] |
| rs74158249 | 0.82[AFR][1000 genomes] |
| rs74158250 | 0.82[AFR][1000 genomes] |
| rs74158252 | 0.82[AFR][1000 genomes] |
| rs74158257 | 0.82[AFR][1000 genomes] |
| rs74158401 | 0.91[AFR][1000 genomes] |
| rs74161605 | 0.91[AFR][1000 genomes] |
| rs74161606 | 0.91[AFR][1000 genomes] |
| rs74161607 | 0.91[AFR][1000 genomes] |
| rs74161608 | 0.91[AFR][1000 genomes] |
| rs74161609 | 0.91[AFR][1000 genomes] |
| rs74161610 | 0.91[AFR][1000 genomes] |
| rs74161621 | 1.00[AFR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:117414000-117419400 | Enhancers | HSMM | muscle |
| 2 | chr10:117418000-117420200 | Enhancers | HSMMtube | muscle |
| 3 | chr10:117418400-117420000 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 4 | chr10:117418800-117419200 | Flanking Active TSS | Muscle Satellite Cultured Cells | -- |
