Variant report
Variant | rs10186950 |
---|---|
Chromosome Location | chr2:177794254-177794255 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10930765 | 0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10930766 | 0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10930767 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10930772 | 1.00[ASN][1000 genomes] |
rs12612709 | 1.00[ASN][1000 genomes] |
rs13422461 | 1.00[ASN][1000 genomes] |
rs1355854 | 0.90[ASN][1000 genomes] |
rs1398967 | 0.90[ASN][1000 genomes] |
rs1398969 | 0.90[ASN][1000 genomes] |
rs1398977 | 0.90[ASN][1000 genomes] |
rs1405614 | 0.90[ASN][1000 genomes] |
rs1513870 | 0.82[ASN][1000 genomes] |
rs1527265 | 1.00[ASN][1000 genomes] |
rs1527266 | 1.00[ASN][1000 genomes] |
rs16864736 | 0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17628074 | 0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17679370 | 0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2196658 | 0.82[ASN][1000 genomes] |
rs2696966 | 1.00[ASN][1000 genomes] |
rs4894207 | 0.90[ASN][1000 genomes] |
rs61177850 | 0.90[ASN][1000 genomes] |
rs6433618 | 0.90[ASN][1000 genomes] |
rs6433624 | 1.00[ASN][1000 genomes] |
rs6710025 | 1.00[ASN][1000 genomes] |
rs6760271 | 0.90[ASN][1000 genomes] |
rs7562938 | 0.90[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv875448 | chr2:177760005-177819108 | Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Active TSS | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
2 | nsv875449 | chr2:177775612-177835010 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
3 | nsv875450 | chr2:177785155-177819108 | Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:177792800-177796600 | Weak transcription | Fetal Heart | heart |