Variant report

Variant	rs2696966
Chromosome Location	chr2:177751028-177751029
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10186950	1.00[ASN][1000 genomes]
rs10930765	1.00[ASN][1000 genomes]
rs10930766	1.00[ASN][1000 genomes]
rs10930767	1.00[ASN][1000 genomes]
rs10930772	1.00[ASN][1000 genomes]
rs12612709	1.00[ASN][1000 genomes]
rs13422461	1.00[ASN][1000 genomes]
rs1355854	0.90[ASN][1000 genomes]
rs1398967	0.90[ASN][1000 genomes]
rs1398969	0.90[ASN][1000 genomes]
rs1398977	0.90[ASN][1000 genomes]
rs1405614	0.90[ASN][1000 genomes]
rs1513870	0.82[ASN][1000 genomes]
rs1527265	1.00[ASN][1000 genomes]
rs1527266	1.00[ASN][1000 genomes]
rs16864736	1.00[ASN][1000 genomes]
rs17628074	1.00[ASN][1000 genomes]
rs17679370	1.00[ASN][1000 genomes]
rs2196658	0.82[ASN][1000 genomes]
rs4894207	0.90[ASN][1000 genomes]
rs61177850	0.90[ASN][1000 genomes]
rs6433618	0.90[ASN][1000 genomes]
rs6433624	1.00[ASN][1000 genomes]
rs6710025	1.00[ASN][1000 genomes]
rs6760271	0.90[ASN][1000 genomes]
rs7562938	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv3050	chr2:177713430-177760533	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:177750800-177751200	Enhancers	Rectal Mucosa Donor 31	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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