Variant report

Variant	rs10930772
Chromosome Location	chr2:177834894-177834895
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10186950	1.00[ASN][1000 genomes]
rs10930765	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10930766	1.00[ASN][1000 genomes]
rs10930767	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12469347	1.00[JPT][hapmap]
rs12612709	1.00[ASN][1000 genomes]
rs12616782	1.00[JPT][hapmap]
rs13005005	1.00[JPT][hapmap]
rs13421731	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13422461	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1355845	1.00[JPT][hapmap]
rs1355854	0.90[ASN][1000 genomes]
rs1398967	0.90[ASN][1000 genomes]
rs1398969	0.90[ASN][1000 genomes]
rs1398977	0.90[ASN][1000 genomes]
rs1405614	0.90[ASN][1000 genomes]
rs1513870	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs1527265	1.00[ASN][1000 genomes]
rs1527266	1.00[ASN][1000 genomes]
rs16864736	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17628074	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17679370	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1866134	1.00[JPT][hapmap]
rs2196658	0.82[ASN][1000 genomes]
rs2696966	1.00[ASN][1000 genomes]
rs4894207	0.90[ASN][1000 genomes]
rs61177850	0.90[ASN][1000 genomes]
rs6433618	0.90[ASN][1000 genomes]
rs6433624	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6707899	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6710025	1.00[ASN][1000 genomes]
rs6760271	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs7562938	0.90[ASN][1000 genomes]
rs7588841	1.00[JPT][hapmap]
rs840698	1.00[JPT][hapmap]
rs840699	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875449	chr2:177775612-177835010	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10930772	OLA1	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:177834600-177835000	Enhancers	Fetal Muscle Leg	muscle

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