Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:33866715..33868482-chr2:33873359..33875488,2	MCF-7	breast:
2	chr2:33869867..33872136-chr2:33872580..33874510,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10166099	0.87[JPT][hapmap]
rs10178622	0.81[ASN][1000 genomes]
rs11124329	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11684779	0.84[ASN][1000 genomes]
rs11688800	0.86[ASN][1000 genomes]
rs1448558	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1839154	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1839156	0.81[ASN][1000 genomes]
rs1839157	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2122020	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2367816	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4670815	0.80[AMR][1000 genomes]
rs4670817	0.80[AMR][1000 genomes]
rs55831235	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs55850044	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6543728	0.80[CEU][hapmap];0.82[JPT][hapmap];0.81[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs6543733	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6543735	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6712178	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6715333	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6737461	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6750267	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7561863	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3350238	chr2:33849408-33979026	Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10188943	FAM98A	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:33869800-33878000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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