The 2.0 version of rSNPBase

Variant report

Variant rs1023882
Chromosome Location chr3:56051662-56051663
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:10 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56033000-56052000 Weak transcription Brain Germinal Matrix brain
2 chr3:56039800-56052400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr3:56041600-56054400 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr3:56041800-56054000 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr3:56047200-56052400 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr3:56047200-56052400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr3:56048600-56052600 Weak transcription Fetal Stomach stomach
8 chr3:56048600-56059000 Weak transcription Fetal Intestine Large intestine
9 chr3:56051200-56051800 Enhancers HUES6 Cell Line embryonic stem cell
10 chr3:56051600-56051800 Weak transcription Ovary ovary

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Last update: Aug 31, 2015