Variant report

Variant rs10426173
Chromosome Location chr19:23419817-23419818
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23398000-23431600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:23399600-23425200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
3 chr19:23399600-23429000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:23400000-23423600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr19:23400400-23430600 ZNF genes & repeats Dnd41 blood
6 chr19:23400400-23432000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr19:23401800-23428200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
8 chr19:23402200-23431400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
9 chr19:23404000-23431200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr19:23407200-23422200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr19:23410800-23420000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
12 chr19:23412200-23421800 Weak transcription Fetal Thymus thymus
13 chr19:23412400-23426200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr19:23412600-23420400 Weak transcription Rectal Smooth Muscle rectum
15 chr19:23412600-23420600 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr19:23412600-23421400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr19:23412600-23424200 Weak transcription Brain Hippocampus Middle brain
18 chr19:23412600-23426000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr19:23412600-23432000 Weak transcription Pancreas Pancrea
20 chr19:23413600-23431200 ZNF genes & repeats Primary hematopoietic stem cells blood
21 chr19:23413600-23431600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr19:23414000-23424800 Weak transcription Placenta Amnion Placenta Amnion
23 chr19:23414200-23420800 Weak transcription Placenta Placenta
24 chr19:23414200-23421400 Weak transcription Muscle Satellite Cultured Cells --
25 chr19:23414200-23421600 Weak transcription Fetal Kidney kidney
26 chr19:23414200-23422400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr19:23414200-23432200 Weak transcription Gastric stomach
28 chr19:23414200-23432200 Weak transcription Ovary ovary
29 chr19:23414400-23424400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr19:23414600-23424200 Weak transcription Osteobl bone
31 chr19:23414800-23421400 Weak transcription H9 Cell Line embryonic stem cell
32 chr19:23416600-23420600 Weak transcription Fetal Heart heart
33 chr19:23416800-23431600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
34 chr19:23417000-23420800 Weak transcription Fetal Brain Male brain
35 chr19:23417000-23422800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr19:23417200-23421400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr19:23417800-23420800 Weak transcription H1 Cell Line embryonic stem cell
38 chr19:23417800-23422400 Strong transcription HUES48 Cell Line embryonic stem cell
39 chr19:23417800-23424400 Strong transcription iPS-20b Cell Line embryonic stem cell
40 chr19:23418000-23421800 Strong transcription HUES64 Cell Line embryonic stem cell
41 chr19:23418000-23421800 Weak transcription HSMM muscle
42 chr19:23418200-23420000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr19:23418400-23429600 ZNF genes & repeats GM12878-XiMat blood
44 chr19:23418800-23420000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr19:23418800-23426600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
46 chr19:23419200-23420400 Weak transcription Duodenum Mucosa Duodenum
47 chr19:23419200-23420600 Weak transcription Adipose Nuclei Adipose
48 chr19:23419200-23420600 Weak transcription Fetal Lung lung
49 chr19:23419200-23420800 Weak transcription Fetal Stomach stomach
50 chr19:23419200-23421400 Weak transcription Left Ventricle heart

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