Variant report

Variant rs11085571
Chromosome Location chr19:23423665-23423666
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23398000-23431600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:23399600-23425200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
3 chr19:23399600-23429000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:23400400-23430600 ZNF genes & repeats Dnd41 blood
5 chr19:23400400-23432000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr19:23401800-23428200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
7 chr19:23402200-23431400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
8 chr19:23404000-23431200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr19:23412400-23426200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr19:23412600-23424200 Weak transcription Brain Hippocampus Middle brain
11 chr19:23412600-23426000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr19:23412600-23432000 Weak transcription Pancreas Pancrea
13 chr19:23413600-23431200 ZNF genes & repeats Primary hematopoietic stem cells blood
14 chr19:23413600-23431600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr19:23414000-23424800 Weak transcription Placenta Amnion Placenta Amnion
16 chr19:23414200-23432200 Weak transcription Gastric stomach
17 chr19:23414200-23432200 Weak transcription Ovary ovary
18 chr19:23414400-23424400 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr19:23414600-23424200 Weak transcription Osteobl bone
20 chr19:23416800-23431600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
21 chr19:23417800-23424400 Strong transcription iPS-20b Cell Line embryonic stem cell
22 chr19:23418400-23429600 ZNF genes & repeats GM12878-XiMat blood
23 chr19:23418800-23426600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
24 chr19:23419800-23430000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr19:23420400-23425200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
26 chr19:23420400-23425200 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
27 chr19:23420400-23426600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
28 chr19:23420600-23425200 ZNF genes & repeats Fetal Brain Female brain
29 chr19:23420600-23425200 ZNF genes & repeats A549 lung
30 chr19:23420600-23425400 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
31 chr19:23420600-23429000 ZNF genes & repeats Primary B cells from cord blood blood
32 chr19:23420600-23431600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr19:23420800-23424000 ZNF genes & repeats Fetal Stomach stomach
34 chr19:23421200-23424200 Weak transcription H1 Cell Line embryonic stem cell
35 chr19:23421200-23425200 ZNF genes & repeats Primary B cells from peripheral blood blood
36 chr19:23421400-23424800 ZNF genes & repeats Primary T cells from cord blood blood
37 chr19:23421400-23426600 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
38 chr19:23421400-23427400 ZNF genes & repeats Thymus Thymus
39 chr19:23421600-23424000 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
40 chr19:23421600-23425200 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
41 chr19:23421800-23424800 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr19:23421800-23425200 ZNF genes & repeats Liver Liver
43 chr19:23422200-23424200 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr19:23422200-23426200 Weak transcription H9 Cell Line embryonic stem cell
45 chr19:23422400-23423800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr19:23422400-23423800 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr19:23422400-23424200 Strong transcription HUES64 Cell Line embryonic stem cell
48 chr19:23422400-23424400 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr19:23422400-23425000 ZNF genes & repeats Fetal Intestine Large intestine
50 chr19:23422400-23425200 ZNF genes & repeats Adipose Nuclei Adipose

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