Variant report

Variant rs7253266
Chromosome Location chr19:23421735-23421736
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23398000-23431600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:23399600-23425200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
3 chr19:23399600-23429000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:23400000-23423600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr19:23400400-23430600 ZNF genes & repeats Dnd41 blood
6 chr19:23400400-23432000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr19:23401800-23428200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
8 chr19:23402200-23431400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
9 chr19:23404000-23431200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr19:23407200-23422200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr19:23412200-23421800 Weak transcription Fetal Thymus thymus
12 chr19:23412400-23426200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr19:23412600-23424200 Weak transcription Brain Hippocampus Middle brain
14 chr19:23412600-23426000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr19:23412600-23432000 Weak transcription Pancreas Pancrea
16 chr19:23413600-23431200 ZNF genes & repeats Primary hematopoietic stem cells blood
17 chr19:23413600-23431600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr19:23414000-23424800 Weak transcription Placenta Amnion Placenta Amnion
19 chr19:23414200-23422400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr19:23414200-23432200 Weak transcription Gastric stomach
21 chr19:23414200-23432200 Weak transcription Ovary ovary
22 chr19:23414400-23424400 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr19:23414600-23424200 Weak transcription Osteobl bone
24 chr19:23416800-23431600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
25 chr19:23417000-23422800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr19:23417800-23422400 Strong transcription HUES48 Cell Line embryonic stem cell
27 chr19:23417800-23424400 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr19:23418000-23421800 Strong transcription HUES64 Cell Line embryonic stem cell
29 chr19:23418000-23421800 Weak transcription HSMM muscle
30 chr19:23418400-23429600 ZNF genes & repeats GM12878-XiMat blood
31 chr19:23418800-23426600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
32 chr19:23419400-23423200 Weak transcription HUVEC blood vessel
33 chr19:23419800-23423200 Weak transcription NH-A brain
34 chr19:23419800-23430000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr19:23420000-23421800 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr19:23420000-23423200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
37 chr19:23420400-23422200 ZNF genes & repeats Duodenum Mucosa Duodenum
38 chr19:23420400-23422400 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
39 chr19:23420400-23422600 ZNF genes & repeats HepG2 liver
40 chr19:23420400-23425200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
41 chr19:23420400-23425200 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
42 chr19:23420400-23426600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
43 chr19:23420600-23421800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr19:23420600-23421800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr19:23420600-23422200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr19:23420600-23422200 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
47 chr19:23420600-23422800 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr19:23420600-23423000 ZNF genes & repeats Brain Germinal Matrix brain
49 chr19:23420600-23423600 ZNF genes & repeats Primary monocytes fromperipheralblood blood
50 chr19:23420600-23425200 ZNF genes & repeats Fetal Brain Female brain

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