Variant report

Variant	rs10494443
Chromosome Location	chr1:165480460-165480461
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs10158373	0.82[EUR][1000 genomes]
rs10494444	0.88[EUR][1000 genomes]
rs10494445	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1326375	1.00[CEU][hapmap];1.00[MEX][hapmap];0.85[EUR][1000 genomes]
rs1648111	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs166949	1.00[CEU][hapmap];1.00[MEX][hapmap];0.85[EUR][1000 genomes]
rs16846405	1.00[CEU][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16846410	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16846549	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16846612	1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16846621	1.00[CEU][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16847312	1.00[CEU][hapmap];0.87[TSI][hapmap]
rs184038	1.00[CEU][hapmap];1.00[MEX][hapmap]
rs184039	0.85[EUR][1000 genomes]
rs192586	1.00[CEU][hapmap]
rs192587	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs2254880	0.85[EUR][1000 genomes]
rs2433131	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs2459240	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs2485399	0.85[EUR][1000 genomes]
rs2485400	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs2485401	1.00[CEU][hapmap];1.00[MEX][hapmap]
rs2485408	0.85[EUR][1000 genomes]
rs285423	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs285424	0.85[EUR][1000 genomes]
rs285433	1.00[CEU][hapmap]
rs285434	1.00[CEU][hapmap]
rs285444	1.00[CEU][hapmap]
rs285446	1.00[CEU][hapmap];1.00[MEX][hapmap]
rs285447	1.00[CEU][hapmap];1.00[MEX][hapmap];0.85[EUR][1000 genomes]
rs285449	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs285450	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs285451	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs285452	0.81[EUR][1000 genomes]
rs285453	0.81[EUR][1000 genomes]
rs285454	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs366124	0.85[EUR][1000 genomes]
rs369231	0.85[EUR][1000 genomes]
rs375780	0.85[EUR][1000 genomes]
rs385649	0.85[EUR][1000 genomes]
rs386186	0.85[EUR][1000 genomes]
rs390395	0.85[EUR][1000 genomes]
rs404612	0.85[EUR][1000 genomes]
rs415710	0.85[EUR][1000 genomes]
rs421361	0.85[EUR][1000 genomes]
rs424313	0.85[EUR][1000 genomes]
rs58628453	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6426916	0.85[EUR][1000 genomes]
rs6659141	0.85[EUR][1000 genomes]
rs6666562	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs74120723	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74120729	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs796570	1.00[CEU][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165467600-165483200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr1:165479600-165481000	Enhancers	Fetal Heart	heart

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