The 2.0 version of rSNPBase

Variant report

Variant rs10512648
Chromosome Location chr5:36141604-36141605
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:36101200-36150800 Weak transcription Colonic Mucosa Colon
2 chr5:36103600-36147200 Weak transcription HUVEC blood vessel
3 chr5:36105600-36142400 Weak transcription NH-A brain
4 chr5:36108400-36150600 Weak transcription Muscle Satellite Cultured Cells --
5 chr5:36108600-36142800 Weak transcription Fetal Kidney kidney
6 chr5:36117400-36150200 Weak transcription Colon Smooth Muscle Colon
7 chr5:36122400-36147800 Weak transcription NHDF-Ad bronchial
8 chr5:36126800-36150400 Weak transcription Fetal Heart heart
9 chr5:36128200-36150800 Weak transcription Psoas Muscle Psoas
10 chr5:36129400-36149200 Weak transcription Fetal Brain Male brain
11 chr5:36129800-36146600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr5:36129800-36148400 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr5:36130000-36143200 Weak transcription K562 blood
14 chr5:36130000-36147400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr5:36132600-36150800 Weak transcription Right Ventricle heart
16 chr5:36134200-36150400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr5:36136600-36149400 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr5:36136600-36150200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr5:36136600-36150600 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr5:36136600-36150600 Weak transcription HSMMtube muscle
21 chr5:36139000-36150600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr5:36139600-36142800 Strong transcription Adipose Nuclei Adipose
23 chr5:36139600-36143200 Strong transcription Primary T helper cells PMA-I stimulated --
24 chr5:36139600-36143400 Strong transcription Duodenum Smooth Muscle Duodenum
25 chr5:36139800-36141800 Strong transcription Primary T cells fromperipheralblood blood
26 chr5:36139800-36142600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr5:36139800-36143200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr5:36139800-36143400 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr5:36139800-36143400 Strong transcription Primary T regulatory cells fromperipheralblood blood
30 chr5:36139800-36143400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr5:36140000-36143200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr5:36140000-36146600 Weak transcription HepG2 liver
33 chr5:36140200-36142400 Strong transcription Placenta Placenta
34 chr5:36140200-36143000 Strong transcription Fetal Muscle Trunk muscle
35 chr5:36140200-36143600 Strong transcription Primary B cells from cord blood blood
36 chr5:36140400-36142200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr5:36140400-36143400 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr5:36140400-36143600 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr5:36140400-36150600 Weak transcription NHLF lung
40 chr5:36140600-36142800 Strong transcription Fetal Intestine Large intestine
41 chr5:36140600-36143200 Strong transcription Primary B cells from peripheral blood blood
42 chr5:36140600-36143400 Strong transcription Fetal Brain Female brain
43 chr5:36140600-36146400 Weak transcription Fetal Intestine Small intestine
44 chr5:36140600-36150400 Weak transcription Brain Inferior Temporal Lobe brain
45 chr5:36140600-36150600 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr5:36140600-36150600 Weak transcription Rectal Smooth Muscle rectum
47 chr5:36140600-36150600 Weak transcription Thymus Thymus
48 chr5:36140600-36150800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr5:36140600-36150800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr5:36140600-36150800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015