Variant report

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ANKRD26-1	chr10:27268231-27270936	NONHSAT011877

rs_ID	r²[population]
rs10764667	0.81[JPT][hapmap]
rs10829152	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10829153	0.83[ASN][1000 genomes]
rs10829154	0.83[ASN][1000 genomes]
rs10829162	0.95[JPT][hapmap]
rs10829163	0.95[JPT][hapmap]
rs10829167	0.95[JPT][hapmap]
rs10829191	0.90[JPT][hapmap]
rs10829192	0.85[JPT][hapmap]
rs11015440	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11015556	0.90[JPT][hapmap]
rs11015559	0.90[JPT][hapmap]
rs11015564	0.90[JPT][hapmap]
rs11015565	0.90[JPT][hapmap]
rs11015571	0.90[JPT][hapmap]
rs12572344	0.90[JPT][hapmap]
rs2274634	0.90[JPT][hapmap]
rs2274635	0.90[JPT][hapmap]
rs2274741	0.95[JPT][hapmap]
rs2297145	0.95[JPT][hapmap]
rs2368217	0.89[JPT][hapmap]
rs3780921	0.90[JPT][hapmap]
rs3780922	0.90[JPT][hapmap]
rs3904244	0.95[JPT][hapmap]
rs3932559	0.90[JPT][hapmap]
rs4749213	0.95[JPT][hapmap]
rs7083768	0.95[JPT][hapmap]
rs7086311	0.95[JPT][hapmap]
rs7088171	0.80[JPT][hapmap]
rs7091723	0.81[CHB][hapmap]
rs7906430	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7910688	0.90[JPT][hapmap]
rs7911508	0.83[ASN][1000 genomes]
rs7914630	0.88[JPT][hapmap]
rs9651378	0.95[JPT][hapmap]

SNP	Gene	Cis/trans	Tissue	Source
rs10741124	C10orf67	cis	parietal	SCAN
rs10741124	MASTL	cis	multi-tissue	Pritchard
rs10741124	ANKRD26	cis	parietal	SCAN
rs10741124	TEKT5	trans	lymphoblastoid	seeQTL
rs10741124	MASTL	cis	cerebellum	SCAN

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:27243000-27294800	Weak transcription	Liver	Liver
2	chr10:27244800-27271800	Weak transcription	Pancreas	Pancrea
3	chr10:27245600-27270200	Weak transcription	Ovary	ovary
4	chr10:27246600-27273000	Weak transcription	Fetal Stomach	stomach
5	chr10:27249800-27271400	Weak transcription	Right Ventricle	heart
6	chr10:27251600-27290000	Weak transcription	Fetal Intestine Large	intestine
7	chr10:27253400-27286400	Weak transcription	Primary hematopoietic stem cells	blood
8	chr10:27254000-27271600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr10:27255400-27286800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr10:27255600-27282600	Weak transcription	Brain Anterior Caudate	brain
11	chr10:27257600-27319000	Weak transcription	Stomach Smooth Muscle	stomach
12	chr10:27258200-27291200	Weak transcription	Left Ventricle	heart
13	chr10:27258400-27290000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr10:27258600-27269800	Weak transcription	Duodenum Smooth Muscle	Duodenum
15	chr10:27258600-27272800	Weak transcription	Skeletal Muscle Male	skeletal muscle
16	chr10:27264000-27271200	Weak transcription	Aorta	Aorta
17	chr10:27268600-27271200	Weak transcription	HUES6 Cell Line	embryonic stem cell
18	chr10:27269000-27273200	Strong transcription	Primary T cells from cord blood	blood
19	chr10:27269000-27293400	Weak transcription	Skeletal Muscle Female	skeletal muscle
20	chr10:27269200-27269600	Strong transcription	Lung	lung
21	chr10:27269200-27270400	Strong transcription	Adipose Nuclei	Adipose

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