Variant report

Variant	rs10742309
Chromosome Location	chr11:33975575-33975576
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:33974189..33975903-chr11:34073513..34076510,2	K562	blood:
2	chr11:33974650..33976899-chr20:48901083..48903698,2	MCF-7	breast:
3	chr11:33964506..33969329-chr11:33972347..33977315,5	K562	blood:
4	chr11:33890163..33892598-chr11:33974129..33977949,5	K562	blood:
5	chr11:33963921..33965507-chr11:33973666..33976002,2	MCF-7	breast:
6	chr11:33890162..33892453-chr11:33974729..33977918,3	K562	blood:

Variant related genes	Relation type
ENSG00000135387	Chromatin interaction
ENSG00000135363	Chromatin interaction

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10430951	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10444269	0.99[ASN][1000 genomes]
rs10444270	0.99[ASN][1000 genomes]
rs10768037	1.00[ASN][1000 genomes]
rs10768038	0.90[ASN][1000 genomes]
rs10768039	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10836133	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10836134	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12273291	1.00[ASN][1000 genomes]
rs2176611	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2421454	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2421467	0.89[ASN][1000 genomes]
rs2901432	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4755352	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4755353	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4755354	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4756086	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4756088	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4996144	0.89[ASN][1000 genomes]
rs61199722	0.80[ASN][1000 genomes]
rs6484681	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6484682	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6484683	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6484684	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6484685	0.90[ASN][1000 genomes]
rs6484686	0.83[ASN][1000 genomes]
rs6484687	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7104709	0.96[ASN][1000 genomes]
rs7120375	0.85[EUR][1000 genomes]
rs7127154	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs713310	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7481489	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7926558	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7940280	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs939038	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33974000-33976600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr11:33974200-33975600	Enhancers	HUVEC	blood vessel
3	chr11:33974200-33975800	Enhancers	Hela-S3	cervix
4	chr11:33974600-33977400	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr11:33975000-33977000	Enhancers	K562	blood
6	chr11:33975000-33977200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr11:33975200-33978400	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr11:33975200-33978600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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