Variant report

Variant	rs4755353
Chromosome Location	chr11:33980303-33980304
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:33889585..33894557-chr11:33980286..33986096,7	K562	blood:
2	chr11:33980192..33982667-chr11:33983352..33985978,2	MCF-7	breast:
3	chr11:33967387..33969309-chr11:33978603..33980649,2	K562	blood:

Variant related genes	Relation type
ENSG00000135363	Chromatin interaction

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10430951	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10444269	0.91[ASN][1000 genomes]
rs10444270	0.91[ASN][1000 genomes]
rs10742309	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10768037	0.90[ASN][1000 genomes]
rs10768038	1.00[ASN][1000 genomes]
rs10768039	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10836133	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10836134	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12273291	0.90[ASN][1000 genomes]
rs2176611	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2421454	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2421467	0.95[ASN][1000 genomes]
rs2901432	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4755352	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4755354	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4756086	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4756088	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4996144	0.95[ASN][1000 genomes]
rs61199722	0.90[ASN][1000 genomes]
rs6484681	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6484682	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6484683	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6484684	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6484685	1.00[ASN][1000 genomes]
rs6484686	0.87[ASN][1000 genomes]
rs6484687	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7104709	0.86[ASN][1000 genomes]
rs7120375	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7127154	0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs713310	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7481489	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7926558	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7940280	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs939038	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33976600-33981400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr11:33977200-33981200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr11:33978000-33981400	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr11:33979200-33981400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr11:33979400-33981200	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr11:33980000-33981400	Weak transcription	K562	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links