Variant report

Variant	rs10768037
Chromosome Location	chr11:33971407-33971408
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:33970294..33973020-chr11:33976765..33978279,2	K562	blood:

Extended variants
information (count: 35 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10430951	0.87[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs10444269	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10444270	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10742309	1.00[ASN][1000 genomes]
rs10768038	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10768039	0.90[ASN][1000 genomes]
rs10836133	0.90[ASN][1000 genomes]
rs10836134	0.90[ASN][1000 genomes]
rs12273291	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1518920	0.84[EUR][1000 genomes]
rs2176611	0.87[CHB][hapmap];0.93[CHD][hapmap];0.81[GIH][hapmap];0.92[JPT][hapmap];0.90[ASN][1000 genomes]
rs2421454	0.90[ASN][1000 genomes]
rs2421467	0.83[CEU][hapmap];0.80[CHB][hapmap];0.92[JPT][hapmap];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2901432	0.90[ASN][1000 genomes]
rs4755352	0.91[ASN][1000 genomes]
rs4755353	0.90[ASN][1000 genomes]
rs4755354	0.89[ASN][1000 genomes]
rs4756086	1.00[CHB][hapmap];0.97[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs4756088	0.87[CHB][hapmap];0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs4996144	0.84[CEU][hapmap];0.80[CHB][hapmap];0.87[CHD][hapmap];0.87[GIH][hapmap];0.92[JPT][hapmap];0.81[MEX][hapmap];0.91[TSI][hapmap];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61199722	0.80[ASN][1000 genomes]
rs6484681	0.94[ASN][1000 genomes]
rs6484682	0.92[ASN][1000 genomes]
rs6484683	0.94[ASN][1000 genomes]
rs6484684	0.90[ASN][1000 genomes]
rs6484685	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6484686	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6484687	0.89[ASN][1000 genomes]
rs7104709	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7127154	0.89[ASN][1000 genomes]
rs713310	0.94[ASN][1000 genomes]
rs7481489	0.90[ASN][1000 genomes]
rs7926558	0.87[CHB][hapmap];0.97[CHD][hapmap];0.81[GIH][hapmap];0.92[JPT][hapmap];0.90[ASN][1000 genomes]
rs7940280	0.94[ASN][1000 genomes]
rs939038	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10768037	DCDC1	cis	parietal	SCAN

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33957800-33972400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:33965000-33974400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr11:33967800-33972200	Enhancers	K562	blood
4	chr11:33970200-33972000	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr11:33970400-33971600	Enhancers	Fetal Brain Male	brain
6	chr11:33970600-33971800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr11:33970600-33972000	Enhancers	Fetal Brain Female	brain
8	chr11:33970800-33974200	Weak transcription	Primary hematopoietic stem cells	blood
9	chr11:33971000-33974000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr11:33971200-33974000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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