Variant report

Variant	rs10745971
Chromosome Location	chr12:103960691-103960692
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10454506	0.96[ASN][1000 genomes]
rs10745972	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10745973	0.91[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs10745974	0.93[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs10778263	0.92[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs10861040	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10861041	0.93[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs1346411	0.93[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs1346412	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1582880	0.81[ASN][1000 genomes]
rs4388997	0.92[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs4764967	0.97[ASN][1000 genomes]
rs6539082	0.96[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs6539083	0.97[ASN][1000 genomes]
rs6539084	0.97[ASN][1000 genomes]
rs7295399	0.81[ASN][1000 genomes]
rs7311417	0.96[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs7955950	0.90[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs7958280	0.97[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10745971	STAB2	cis	Thyroid	GTEx

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103959200-103961000	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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