The 2.0 version of rSNPBase

Variant report

Variant rs10752923
Chromosome Location chr1:172243477-172243478
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172225600-172246600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:172236200-172247000 Weak transcription Muscle Satellite Cultured Cells --
3 chr1:172239000-172262000 Weak transcription Fetal Muscle Leg muscle
4 chr1:172239400-172244000 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr1:172239800-172243600 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr1:172239800-172246600 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr1:172240000-172247600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr1:172240200-172247400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:172240400-172246400 Weak transcription Osteobl bone
10 chr1:172242400-172243800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr1:172242400-172243800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:172242800-172245600 Enhancers Fetal Heart heart
13 chr1:172243000-172243600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:172243000-172243600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr1:172243000-172243600 Enhancers Ovary ovary
16 chr1:172243000-172243600 Flanking Active TSS GM12878-XiMat blood
17 chr1:172243000-172243600 Enhancers NHDF-Ad bronchial
18 chr1:172243000-172245000 Enhancers A549 lung
19 chr1:172243200-172243600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr1:172243200-172246200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:172243400-172243600 Enhancers H1 Cell Line embryonic stem cell
22 chr1:172243400-172244200 Enhancers Pancreas Pancrea
23 chr1:172243400-172247000 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015