The 2.0 version of rSNPBase

Variant report

Variant rs2586390
Chromosome Location chr1:172252793-172252794
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:17 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172239000-172262000 Weak transcription Fetal Muscle Leg muscle
2 chr1:172247800-172255800 Weak transcription Left Ventricle heart
3 chr1:172247800-172256000 Weak transcription Brain Angular Gyrus brain
4 chr1:172248000-172253600 Weak transcription Colon Smooth Muscle Colon
5 chr1:172248200-172255400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:172248200-172255400 Weak transcription HSMM muscle
7 chr1:172248200-172255400 Weak transcription NHLF lung
8 chr1:172248200-172255800 Weak transcription Aorta Aorta
9 chr1:172249200-172255400 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:172249200-172255600 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:172249400-172256000 Weak transcription Esophagus oesophagus
12 chr1:172249600-172255000 Weak transcription NHDF-Ad bronchial
13 chr1:172251800-172253200 Enhancers Primary neutrophils fromperipheralblood blood
14 chr1:172251800-172257000 Weak transcription Right Ventricle heart
15 chr1:172252400-172252800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:172252400-172253200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr1:172252600-172253000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015