Variant report

Variant	rs10834912
Chromosome Location	chr11:26156111-26156112
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10501037	0.83[EUR][1000 genomes]
rs10734369	0.84[EUR][1000 genomes]
rs10767515	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11029130	0.83[EUR][1000 genomes]
rs11029133	0.83[EUR][1000 genomes]
rs11029137	0.88[EUR][1000 genomes]
rs11029253	0.87[EUR][1000 genomes]
rs1489506	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1552582	0.85[EUR][1000 genomes]
rs1826052	0.86[EUR][1000 genomes]
rs3926027	0.80[ASN][1000 genomes]
rs4923339	0.82[EUR][1000 genomes]
rs59456245	0.83[EUR][1000 genomes]
rs7131491	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72885762	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760599	chr11:25186984-26159450	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv832094	chr11:26130733-26292782	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26155800-26156600	Enhancers	Hela-S3	cervix
2	chr11:26155800-26156800	Enhancers	Primary B cells from peripheral blood	blood
3	chr11:26156000-26156600	Enhancers	Brain Hippocampus Middle	brain
4	chr11:26156000-26156800	Enhancers	Primary B cells from cord blood	blood
5	chr11:26156000-26156800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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