Variant report

Variant	rs10767515
Chromosome Location	chr11:26111960-26111961
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10501037	0.87[EUR][1000 genomes]
rs10734369	0.84[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10734371	0.82[ASN][1000 genomes]
rs10742133	0.82[ASN][1000 genomes]
rs10742134	0.82[EUR][1000 genomes]
rs10767505	0.87[ASN][1000 genomes]
rs10767506	0.82[EUR][1000 genomes]
rs10767508	0.82[EUR][1000 genomes]
rs10767511	0.82[EUR][1000 genomes]
rs10767512	0.81[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs10834904	0.82[EUR][1000 genomes]
rs10834912	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11029130	0.87[EUR][1000 genomes]
rs11029133	0.87[EUR][1000 genomes]
rs11029137	0.96[EUR][1000 genomes]
rs11029253	0.81[EUR][1000 genomes]
rs1387490	0.85[EUR][1000 genomes]
rs1489501	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1489502	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1489506	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1552582	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1586607	0.82[ASN][1000 genomes]
rs1826052	0.92[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs1994547	0.82[EUR][1000 genomes]
rs1994548	0.82[EUR][1000 genomes]
rs1994549	0.82[EUR][1000 genomes]
rs3926027	0.84[AFR][1000 genomes]
rs4923339	0.92[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs59456245	0.87[EUR][1000 genomes]
rs7102366	0.95[ASN][1000 genomes]
rs7131491	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72885762	0.87[EUR][1000 genomes]
rs7927402	0.82[ASN][1000 genomes]
rs7927514	0.82[ASN][1000 genomes]
rs7942563	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760599	chr11:25186984-26159450	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26101400-26112600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:26110400-26112400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr11:26110800-26112800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr11:26111200-26115400	Weak transcription	Primary B cells from cord blood	blood
5	chr11:26111800-26114800	Weak transcription	Primary B cells from peripheral blood	blood

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