Variant report

Variant	rs10835889
Chromosome Location	chr11:32370380-32370381
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32370192..32372693-chr11:32377317..32379133,2	K562	blood:

Extended variants
information (count: 31 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10767930	0.89[ASN][1000 genomes]
rs10767931	0.89[ASN][1000 genomes]
rs10835887	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs10835888	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs11031714	0.85[EUR][1000 genomes]
rs11031716	0.89[EUR][1000 genomes]
rs11031724	0.85[ASN][1000 genomes]
rs11031726	0.81[ASN][1000 genomes]
rs11031728	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11031729	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs11031731	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11031733	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11828433	0.89[EUR][1000 genomes]
rs12278882	0.85[ASN][1000 genomes]
rs12280757	0.85[ASN][1000 genomes]
rs12285028	0.88[EUR][1000 genomes]
rs12285041	0.88[EUR][1000 genomes]
rs17673047	1.00[CHB][hapmap]
rs2057178	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61889170	0.83[EUR][1000 genomes]
rs61889172	0.83[EUR][1000 genomes]
rs61889173	0.83[EUR][1000 genomes]
rs61889183	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61889186	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61889187	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7106353	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7121219	0.85[EUR][1000 genomes]
rs7122775	0.96[ASN][1000 genomes]
rs7123725	0.85[ASN][1000 genomes]
rs7127500	0.85[ASN][1000 genomes]
rs7924866	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10835889	EIF3M	cis	parietal	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32361000-32372400	Enhancers	Fetal Heart	heart
2	chr11:32369600-32370400	Enhancers	Duodenum Smooth Muscle	Duodenum
3	chr11:32369600-32370800	Enhancers	Colon Smooth Muscle	Colon
4	chr11:32370000-32375000	Weak transcription	Rectal Smooth Muscle	rectum

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