Variant report

Variant	rs10836914
Chromosome Location	chr11:4913057-4913058
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:4912456..4914892-chr11:4916437..4919051,2	K562	blood:

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10500627	0.83[CHB][hapmap]
rs10500628	0.86[CHB][hapmap]
rs10742412	0.82[CHB][hapmap]
rs10768355	0.82[CHB][hapmap]
rs10836927	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap]
rs10836931	0.87[CHB][hapmap]
rs10836932	0.82[CHB][hapmap]
rs10836934	0.83[CHB][hapmap]
rs10836935	0.87[CHB][hapmap]
rs10836936	0.86[CHB][hapmap]
rs11034546	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11034554	0.95[CHB][hapmap];1.00[JPT][hapmap]
rs11034573	1.00[ASW][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.87[TSI][hapmap];0.89[YRI][hapmap]
rs11034574	0.91[CHB][hapmap];0.93[CHD][hapmap];0.95[JPT][hapmap]
rs11034590	0.81[CHB][hapmap]
rs11034596	0.83[CHB][hapmap];1.00[GIH][hapmap];0.87[TSI][hapmap]
rs11034602	0.83[CHB][hapmap];1.00[GIH][hapmap];0.87[TSI][hapmap]
rs12576085	0.90[ASW][hapmap];0.89[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.81[LWK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap]
rs12577475	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1368831	0.87[CHB][hapmap]
rs2570574	0.81[JPT][hapmap]
rs2570586	0.81[JPT][hapmap]
rs4910692	0.95[CHB][hapmap];0.80[CHD][hapmap];0.90[JPT][hapmap]
rs7109669	0.80[CHB][hapmap]
rs7932754	0.85[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048224	chr11:4390227-4920324	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
2	nsv540917	chr11:4390227-4920324	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
3	nsv1054847	chr11:4642875-5200656	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
4	nsv467666	chr11:4815348-4917089	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
5	nsv553184	chr11:4815348-4917089	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
6	esv2758254	chr11:4907893-5135331	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
7	esv2759799	chr11:4907893-5135331	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:4911000-4913800	Enhancers	K562	blood
2	chr11:4912400-4914000	Enhancers	Muscle Satellite Cultured Cells	--
3	chr11:4912600-4913800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr11:4912600-4913800	Enhancers	NH-A	brain
5	chr11:4912600-4913800	Enhancers	NHEK	skin
6	chr11:4912600-4913800	Enhancers	Osteobl	bone
7	chr11:4912800-4913200	Enhancers	HSMM	muscle
8	chr11:4912800-4913800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr11:4912800-4913800	Enhancers	HMEC	breast
10	chr11:4912800-4913800	Enhancers	NHDF-Ad	bronchial
11	chr11:4913000-4913800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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