The 2.0 version of rSNPBase

Variant report

Variant rs10871309
Chromosome Location chr16:75368259-75368260
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:75338800-75426400 Weak transcription H9 Cell Line embryonic stem cell
2 chr16:75339400-75411800 Weak transcription H1 Cell Line embryonic stem cell
3 chr16:75340400-75374800 Weak transcription Aorta Aorta
4 chr16:75340800-75373400 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr16:75342200-75381200 Weak transcription Esophagus oesophagus
6 chr16:75344000-75376400 Weak transcription Gastric stomach
7 chr16:75348400-75374200 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr16:75352200-75376400 Weak transcription Pancreas Pancrea
9 chr16:75352200-75396000 Weak transcription Lung lung
10 chr16:75354600-75373400 Weak transcription Left Ventricle heart
11 chr16:75354600-75375000 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr16:75354800-75370800 Weak transcription Brain Anterior Caudate brain
13 chr16:75354800-75372400 Weak transcription Fetal Lung lung
14 chr16:75354800-75374800 Weak transcription Liver Liver
15 chr16:75354800-75413600 Weak transcription Fetal Thymus thymus
16 chr16:75355000-75374600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr16:75355400-75375000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr16:75355400-75379800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr16:75357400-75374400 Weak transcription Osteobl bone
20 chr16:75357400-75374800 Weak transcription NHDF-Ad bronchial
21 chr16:75358000-75374800 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr16:75358200-75374400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr16:75358200-75374800 Weak transcription NHLF lung
24 chr16:75358400-75371000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr16:75358400-75371800 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr16:75358400-75372000 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr16:75358400-75373400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr16:75358400-75374000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr16:75358400-75374600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr16:75358400-75374600 Weak transcription NH-A brain
31 chr16:75358400-75374600 Weak transcription NHEK skin
32 chr16:75358400-75374800 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr16:75358400-75374800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr16:75358400-75421400 Weak transcription K562 blood
35 chr16:75359400-75371000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr16:75359400-75374800 Weak transcription Psoas Muscle Psoas
37 chr16:75359400-75376400 Weak transcription Ovary ovary
38 chr16:75359600-75373400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr16:75359600-75373600 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr16:75359600-75374400 Weak transcription HMEC breast
41 chr16:75360000-75371800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr16:75360600-75372200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr16:75360600-75373600 Weak transcription Brain Germinal Matrix brain
44 chr16:75360800-75374400 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr16:75362000-75370800 Weak transcription Fetal Stomach stomach
46 chr16:75362200-75371600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr16:75363600-75374600 Weak transcription HSMM muscle
48 chr16:75364000-75376400 Weak transcription Right Ventricle heart
49 chr16:75364400-75375200 Weak transcription Duodenum Mucosa Duodenum
50 chr16:75364600-75370200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015