Variant report

Variant	rs12922951
Chromosome Location	chr16:75355096-75355097
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr16:75346961..75349343-chr16:75353275..75355911,2	K562	blood:
2	chr16:75343930..75345714-chr16:75353752..75355854,2	MCF-7	breast:
3	chr16:75352995..75355512-chr16:75367418..75369900,2	K562	blood:

Extended variants
information (count: 257 )
Associated
traits (count: 5 )

rSNPs within LD-proxies of this variant (count:252)

rs_ID	r²[population]
rs1011121	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1017239	0.80[ASN][1000 genomes]
rs10431974	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10459859	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10514393	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10514396	0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10781976	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10871309	0.96[ASN][1000 genomes]
rs10871311	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1109341	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1109342	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11149815	0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11149816	0.80[ASN][1000 genomes]
rs11149818	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11149820	0.87[AFR][1000 genomes];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11149822	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11149824	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11149825	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11149828	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11149829	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11149830	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11149831	0.92[ASN][1000 genomes]
rs11149832	0.81[EUR][1000 genomes]
rs11149833	0.80[EUR][1000 genomes]
rs11640018	0.92[ASN][1000 genomes]
rs11640218	0.85[ASN][1000 genomes]
rs11640674	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11641308	0.87[ASN][1000 genomes]
rs11641311	0.88[ASN][1000 genomes]
rs11641532	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11641587	0.81[EUR][1000 genomes]
rs11641801	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11642572	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11642921	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11643410	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11644306	0.82[EUR][1000 genomes]
rs11644592	0.92[ASN][1000 genomes]
rs11644639	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11644741	0.80[EUR][1000 genomes]
rs11645329	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11646044	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11646418	0.81[ASN][1000 genomes]
rs11646677	0.84[AFR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11646852	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11648176	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11649638	0.82[EUR][1000 genomes]
rs11858992	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11860231	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11860284	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11861810	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11862095	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11862582	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11862684	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11862719	0.83[ASN][1000 genomes]
rs11864102	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11864587	0.87[ASN][1000 genomes]
rs11865004	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11865296	0.81[ASN][1000 genomes]
rs12051111	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12051136	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12051326	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12149063	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12443834	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12443904	0.85[AFR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12444589	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12445211	0.80[ASN][1000 genomes]
rs12445726	0.80[EUR][1000 genomes]
rs12445813	0.80[ASN][1000 genomes]
rs12448947	0.80[ASN][1000 genomes]
rs12599361	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12917651	0.80[EUR][1000 genomes]
rs12924782	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12924920	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12927562	0.80[EUR][1000 genomes]
rs12928036	0.84[EUR][1000 genomes]
rs12928898	0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12929673	0.80[EUR][1000 genomes]
rs12929908	0.81[EUR][1000 genomes]
rs12930452	0.80[EUR][1000 genomes]
rs12930768	0.81[EUR][1000 genomes]
rs12933281	0.81[EUR][1000 genomes]
rs12935787	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1364077	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1364078	0.87[AFR][1000 genomes];0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1364079	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1542864	0.83[EUR][1000 genomes]
rs1544810	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1549306	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1559339	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs166013	0.86[ASN][1000 genomes]
rs17685540	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17696696	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17696749	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1808434	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1808435	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1808436	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1862706	0.94[ASN][1000 genomes]
rs1895490	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2032926	0.80[ASN][1000 genomes]
rs2059256	0.88[AFR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2113232	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2161648	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2161684	0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2285222	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2285223	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2285224	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2285225	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28558946	0.82[EUR][1000 genomes]
rs2865528	0.85[AFR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2865530	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2865531	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28655617	0.82[EUR][1000 genomes]
rs2903033	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34021527	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34029337	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34222958	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34296964	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34624768	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34673655	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35209155	0.80[EUR][1000 genomes]
rs35214308	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35261357	0.88[ASN][1000 genomes]
rs35263058	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35409574	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35415181	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35552529	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35683383	0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs35737321	0.85[AFR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35787595	0.80[EUR][1000 genomes]
rs35937717	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35952313	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3743607	0.90[ASN][1000 genomes]
rs3743609	0.83[EUR][1000 genomes]
rs3784935	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3851733	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3851734	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3851735	0.80[ASN][1000 genomes]
rs3851737	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3851738	0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3851740	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3863442	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3863445	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3863446	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3863447	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4146809	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4146810	0.84[AFR][1000 genomes];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4243111	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4243112	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4558442	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs4594277	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4638613	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4887815	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4887816	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4887818	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4887820	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4887821	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4887822	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4887823	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4887824	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4887829	0.82[EUR][1000 genomes]
rs4888372	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4888376	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4888378	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4888379	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4888380	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4888381	0.81[ASN][1000 genomes]
rs4888383	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4888385	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4888386	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4888387	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4888388	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4888389	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4888390	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4888391	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4888392	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4888400	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4888403	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4888404	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4888405	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4888406	0.84[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4888407	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4888408	0.91[ASN][1000 genomes]
rs4888409	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4888410	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4888411	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4888412	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4888413	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4888414	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4888415	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4888416	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4888418	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4888425	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4888426	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4888427	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4993969	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4993970	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56004344	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56343285	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs59465235	0.83[EUR][1000 genomes]
rs59686216	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs60730309	0.84[AFR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62059808	0.96[ASN][1000 genomes]
rs62059845	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62059846	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62062564	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62062565	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62062567	0.84[AFR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62062568	0.85[AFR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62062572	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6564249	0.82[ASN][1000 genomes]
rs6564252	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6564258	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6564259	0.88[ASN][1000 genomes]
rs67409275	0.85[AFR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs71394207	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7184525	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7185640	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7188231	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7188604	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7191890	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7194129	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7198873	0.81[ASN][1000 genomes]
rs7199062	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7199132	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7200053	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7200616	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7202567	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7203157	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7204984	0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7206541	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7206665	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72787160	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7499872	0.84[AFR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs766521	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8046000	0.92[ASN][1000 genomes]
rs8046109	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8048527	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8050059	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8050662	0.81[ASN][1000 genomes]
rs8050769	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8051407	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8054769	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8055974	0.80[EUR][1000 genomes]
rs8056080	0.89[AFR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8056236	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8057203	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8057535	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8057849	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8060955	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8182132	0.87[ASN][1000 genomes]
rs9922008	0.94[ASN][1000 genomes]
rs9933956	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1061095	chr16:74519718-75407020	Strong transcription Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	123 gene(s)	inside rSNPs	diseases
2	nsv532560	chr16:74692406-75411912	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	111 gene(s)	inside rSNPs	diseases
3	nsv916502	chr16:74845880-75732365	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	131 gene(s)	inside rSNPs	diseases
4	nsv931939	chr16:75261354-75765025	Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
5	nsv833283	chr16:75302175-75392308	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

mRNA abundance (count:5)

SNP	Gene	Cis/trans	Tissue	Source
rs12922951	RP11-252K23.2	cis	Esophagus Mucosa	GTEx
rs12922951	RP11-252K23.2	cis	lung	GTEx
rs12922951	RP11-252K23.2	cis	Artery Tibial	GTEx
rs12922951	RP11-252K23.2	cis	Thyroid	GTEx
rs12922951	CFDP1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:95 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:75317400-75358000	Weak transcription	Fetal Brain Male	brain
2	chr16:75338800-75426400	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr16:75339200-75358000	Weak transcription	Brain Germinal Matrix	brain
4	chr16:75339400-75411800	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr16:75340400-75374800	Weak transcription	Aorta	Aorta
6	chr16:75340800-75357800	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr16:75340800-75373400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr16:75341800-75364600	Weak transcription	Hela-S3	cervix
9	chr16:75342200-75357200	Weak transcription	Placenta	Placenta
10	chr16:75342200-75381200	Weak transcription	Esophagus	oesophagus
11	chr16:75344000-75376400	Weak transcription	Gastric	stomach
12	chr16:75344600-75361400	Weak transcription	Rectal Mucosa Donor 29	rectum
13	chr16:75344800-75359000	Weak transcription	Psoas Muscle	Psoas
14	chr16:75345600-75357200	Weak transcription	A549	lung
15	chr16:75347600-75358200	Weak transcription	Fetal Brain Female	brain
16	chr16:75347600-75366000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr16:75347800-75357800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
18	chr16:75348400-75374200	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr16:75351600-75363200	Weak transcription	HepG2	liver
20	chr16:75352000-75361200	Weak transcription	Fetal Stomach	stomach
21	chr16:75352000-75368000	Weak transcription	Fetal Muscle Trunk	muscle
22	chr16:75352200-75357800	Weak transcription	Fetal Kidney	kidney
23	chr16:75352200-75362600	Weak transcription	Fetal Intestine Large	intestine
24	chr16:75352200-75376400	Weak transcription	Pancreas	Pancrea
25	chr16:75352200-75396000	Weak transcription	Lung	lung
26	chr16:75352400-75358000	Weak transcription	K562	blood
27	chr16:75353200-75355400	Enhancers	Breast Myoepithelial Primary Cells	Breast
28	chr16:75353200-75355600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr16:75353400-75355200	Enhancers	Cortex derived primary cultured neurospheres	brain
30	chr16:75353400-75355600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr16:75353400-75358000	Enhancers	NHEK	skin
32	chr16:75353800-75357400	Weak transcription	Fetal Intestine Small	intestine
33	chr16:75354000-75355400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
34	chr16:75354000-75355600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
35	chr16:75354000-75355800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
36	chr16:75354200-75355200	Enhancers	Primary T cells fromperipheralblood	blood
37	chr16:75354200-75355200	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
38	chr16:75354200-75355400	Enhancers	Primary T killer memory cells from peripheral blood	blood
39	chr16:75354200-75355600	Enhancers	Primary T helper cells PMA-I stimulated	--
40	chr16:75354200-75355600	Enhancers	Primary T helper cells fromperipheralblood	blood
41	chr16:75354200-75355800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr16:75354200-75356200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr16:75354400-75355200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
44	chr16:75354400-75355200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
45	chr16:75354400-75355400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr16:75354400-75355600	Enhancers	GM12878-XiMat	blood
47	chr16:75354600-75355400	Bivalent Enhancer	Primary T cells from cord blood	blood
48	chr16:75354600-75355600	Enhancers	HSMMtube	muscle
49	chr16:75354600-75355800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
50	chr16:75354600-75356000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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