The 2.0 version of rSNPBase

Variant report

Variant rs4558442
Chromosome Location chr16:75333365-75333366
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:75315000-75335600 Weak transcription Psoas Muscle Psoas
2 chr16:75317000-75335600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr16:75317400-75358000 Weak transcription Fetal Brain Male brain
4 chr16:75320800-75339000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr16:75321800-75337600 Weak transcription A549 lung
6 chr16:75322000-75337600 Strong transcription Fetal Intestine Large intestine
7 chr16:75322400-75338000 Weak transcription Stomach Mucosa stomach
8 chr16:75322800-75335600 Weak transcription Placenta Amnion Placenta Amnion
9 chr16:75323000-75337400 Weak transcription K562 blood
10 chr16:75323200-75335800 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr16:75323200-75337800 Strong transcription Rectal Mucosa Donor 29 rectum
12 chr16:75323400-75338200 Weak transcription NH-A brain
13 chr16:75323600-75339000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr16:75323600-75339000 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr16:75323600-75339200 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr16:75323800-75336600 Strong transcription Duodenum Mucosa Duodenum
17 chr16:75323800-75337800 Strong transcription Sigmoid Colon Sigmoid Colon
18 chr16:75323800-75338400 Strong transcription Dnd41 blood
19 chr16:75323800-75339000 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr16:75324000-75338400 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr16:75324000-75338800 Strong transcription Primary T helper cells fromperipheralblood blood
22 chr16:75324600-75337800 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr16:75324800-75340200 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr16:75325000-75335000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr16:75325000-75339600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
26 chr16:75325200-75334800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr16:75325200-75338800 Strong transcription Primary T cells from cord blood blood
28 chr16:75325200-75340800 Strong transcription iPS-20b Cell Line embryonic stem cell
29 chr16:75326200-75338800 Strong transcription Primary T helper cells PMA-I stimulated --
30 chr16:75326200-75339000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr16:75327000-75333600 Weak transcription Fetal Brain Female brain
32 chr16:75327000-75334800 Weak transcription Colon Smooth Muscle Colon
33 chr16:75327000-75335200 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr16:75327000-75335200 Weak transcription Muscle Satellite Cultured Cells --
35 chr16:75327000-75335200 Weak transcription Gastric stomach
36 chr16:75327000-75339200 Weak transcription Fetal Kidney kidney
37 chr16:75327400-75334600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr16:75327400-75339200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr16:75327800-75337400 Weak transcription HSMM muscle
40 chr16:75328000-75337600 Strong transcription Fetal Intestine Small intestine
41 chr16:75328200-75337800 Weak transcription Hela-S3 cervix
42 chr16:75328400-75334600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr16:75328600-75339400 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr16:75329000-75340400 Strong transcription Thymus Thymus
45 chr16:75329200-75338000 Strong transcription Placenta Placenta
46 chr16:75329200-75339200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr16:75329600-75339000 Strong transcription Primary T cells fromperipheralblood blood
48 chr16:75329800-75333400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
49 chr16:75329800-75334000 Strong transcription Colonic Mucosa Colon
50 chr16:75330200-75338600 Strong transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015